Salmonella enterica Choleraesuis SC-B67 |
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Putative Salmonella enterica Choleraesuis SC-B67 RM systems
Ref: Chiu,C.H. et al. Nucleic Acids Res. 33 (5), 1690-1698 (2005)
REBASE ref # 8928
| Sequence length: | GenBank #: | |
| Chromosome: | 4,755,700 bp | AE017220 (NC_006905) |
| plasmid pSC138: | 138,742 bp | AY509004 (NC_006856) |
REBASE acronym: SenC
Org_num: 4089
All begin SCH_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1993 | permease | |||
| 1994 | V | V.StyUK1DcmP (100% identity) | V.SenCORF1995P | |
| 1995 | M | M.SenS151DcmP (100% identity) | CCWGG | M.SenCORF1995P |
| 1996 | hydrolase | |||
| 3323 | DNA-binding protein fis | |||
| 3324 | M | M.SenA50ORF3534P (100% identity) | ATGCAT | M.SenCORF3324P |
| 3325 | periplasmic protein | |||
| 3415 | D-ribulose-5-phosphate 3-epimerase | |||
| 3416 | M | M.StyTDamP (100% identity) | GATC | M.SenCDamP |
| 3417 | membrane protein | |||
| 4350 | 121 aa hypothetical protein | |||
| 4351 | M | M.SenTC177ORF20135P (100% identity) | ACGGC | M.SenCORF4351P |
| 4352 | 695 aa hypothetical protein | |||
| plasmid pSC138 | ||||
| 129 | 73 aa hypothetical protein | |||
| 130 | M | M.Ssp14523ORF22990P (100% identity) | M.SenCORF130P | |
| 131 | 41 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 397 | inner membrane protein | |||
| 398 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.SenCORF398P |
| 399 | R | SenS151ORF5850P (100% identity) | CAGAG | SenCORF398P |
| 400 | cytoplasmic protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1201 | replication protein | |||
| 1202 | M | M.SenTC177ORF13020P (100% identity) | GATC | M.SenCORF1202P |
| 1203 | crossover junction endodeoxyribonuclease | |||