Brochothrix thermosphacta |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Brochothrix thermosphacta RM systems
Ref: Illikoud,N. unpublished
REBASE ref # 26694
| Sequence length: | GenBank #: | |
| Chromosome: | 2,484,934 bp | OBMV00000000 (NZ_OBMV00000000) |
| Chromosome: | 2,609,796 bp | OUNC00000000 (NZ_OUNC00000000) |
| Chromosome: | 2,534,688 bp | OOIK00000000 (NZ_OOIK00000000) |
| Chromosome: | 2,501,148 bp | OUNB00000000 (NZ_OUNB00000000) |
| chromosome CD337: | 2,594,377 bp | LT993737 |
REBASE acronym: Bth337
Org_num: 29247
All begin BTBSAS_, BTCD_, BTEBP_, BTH160X_, BTTAP_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40051 | 131 aa hypothetical protein | |||
| 40052 | M | Site-specific DNA-methyltransferase | M.BthHO01ORF40052P | |
| 40053 | 202 aa hypothetical protein | |||
| 40053 | 202 aa hypothetical protein | |||
| 40054 | M | M.VspHDW17BORF1175P (63% identity) | M.BthHO01ORF40054P | |
| 40055 | S | S.Bla1821LORF7445P (42% identity) | S.BthHO01ORF40054P | |
| 40056 | R | VspHDW17BORF1175P (65% identity) | BthHO01ORF40054P | |
| 40057 | 258 aa conserved hypothetical protein | |||
| chromosome CD337 | ||||
| 427 | protein of unknown function | |||
| 428 | R | Bth6ORF12465P (99% identity) | Bth337ORF429P | |
| 429 | M | M.Bth6ORF12465P (100% identity) | M.Bth337ORF429P | |
| 430 | Integrase family protein | |||
| 431 | S | S.Efa242ORFFP (65% identity) | S.Bth337ORF429P | |
| 432 | protein of unknown function | |||
| 1217 | conserved protein of unknown function | |||
| 1218 | M | type I restriction-modification system, | M.Bth337ORF1218P | |
| 1219 | S | S.Lla9446ORF1182P (43% identity) | S.Bth337ORF1218P | |
| ??? | R | hypothetical protein | Bth337ORF1218P | |
| 1222 | conserved protein of unknown function | |||
| 2505 | conserved protein of unknown function | |||
| 2506 | R | LlaLG26ORF8995P (78% identity) | Bth337ORF2508P | |
| 2507 | S | S.Sgo257II (46% identity) | S.Bth337ORF2508P | |
| ??? | M | M.LlaLG26ORF8995P (77% identity) | M.Bth337ORF2508P | |
| 2510 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 50268 | conserved membrane hypothetical protein | |||
| 50269 | R | BthBIORF595P (96% identity) | BthHO01ORF50270P | |
| 50270 | M | M.Bth6ORF7740P (100% identity) | M.BthHO01ORF50270P | |
| 50271 | 567 aa hypothetical protein | |||
| Chromosome | ||||
| 120011 | 119 aa conserved hypothetical protein | |||
| 120012 | RM | EfaC94ORF13690P (64% identity) | Bth13ORF120012P | |
| 120013 | transcriptional regulator, MerR family | |||
| 200026 | 68 aa conserved hypothetical protein | |||
| 200027 | M | M.LspCORF3739P (25% identity) | M.Bth13ORF200027AP | |
| 200028 | 200 aa hypothetical protein | |||
| 200029 | M | Phi-3T prophage-derived modification methylase | M.Bth13ORF200027BP | |
| 200030 | 96 aa conserved hypothetical protein | |||
| 130022 | 137 aa conserved hypothetical protein | |||
| 130023 | R | Ssa7778AORF200374P (33% identity) | Bth13ORF130024P | |
| ??? | M | M.Asp2985ORFAP (40% identity) | M.Bth13ORF130024P | |
| 130025 | 59 aa conserved hypothetical protein | |||
| 110069 | 358 aa conserved hypothetical protein | |||
| 110070 | M | M.EfaDM01II (90% identity) | M.Bth13ORF110070P | |
| 110071 | 242 aa conserved hypothetical protein | |||
| 20136 | 246 aa hypothetical protein | |||
| 20137 | R | BthBIIPDptHP (99% identity) | Bth13DptHP | |
| 20138 | DNA phosphorothioation-dependent restriction | |||
| 20137 | 1720 aa conserved hypothetical protein | |||
| 20138 | R | BthBIIPDptGP (100% identity) | Bth13DptGP | |
| 20139 | DNA phosphorothioation-dependent restriction | |||
| 20138 | DNA phosphorothioation-dependent restriction | |||
| 20139 | R | BthBIIPDptFP (100% identity) | Bth13DptFP | |
| 20140 | Modification methylase Sau3AI | |||
| 20139 | DNA phosphorothioation-dependent restriction | |||
| 20140 | M | M.Bth175ORF10268P (100% identity) | M.Bth13ORF20140P | |
| 20141 | R | Bth6ORF7740P (99% identity) | Bth13ORF20140P | |
| 20142 | conserved membrane hypothetical protein | |||
| Chromosome | ||||
| 10213 | 60 aa conserved hypothetical protein | |||
| 10214 | M | M.CesCF016ORF22470P (54% identity) | M.Bth3070ORF10214P | |
| 10215 | R | CpaC7ORF1675P (38% identity) | Bth3070ORF10214P | |
| 10216 | 291 aa conserved hypothetical protein | |||
| Chromosome | ||||
| 220001 | 119 aa conserved hypothetical protein | |||
| 220002 | M | M.LmoB3872ORF319P (61% identity) | M.Bth175ORF220002P | |
| 220003 | 535 aa conserved hypothetical protein | |||
| 140015 | DNA helicase / endonuclease; HGT | |||
| 140016 | RM | Vfl25B2ORF6750P (68% identity) | Bth175ORF140016P | |
| 140017 | 29 aa hypothetical protein | |||
| 10266 | conserved membrane hypothetical protein | |||
| ??? | R | BthBIORF595P (100% identity) | Bth175ORF10268P | |
| 10268 | M | M.Bth13ORF20140P (100% identity) | M.Bth175ORF10268P | |
| 10269 | restriction endonuclease BglII | |||
| chromosome CD337 | ||||
| 1522 | protein of unknown function | |||
| 1523 | R | Jsp2502ORF10650P (15% identity) | Bth337ORF1524P | |
| 1524 | M | M.BspN165ORFAP (62% identity) | M.Bth337ORF1524P | |
| 1525 | conserved membrane protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20168 | DNA mismatch repair protein MutT | |||
| 20169 | R | Bth818ORF6565P (99% identity) | Bth3070ORF20169P | |
| 20170 | conserved membrane hypothetical protein | |||