Klebsiella quasipneumoniae CAV2013 |
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Putative Klebsiella quasipneumoniae CAV2013 RM systems
Ref: Mathers,A.J. et al. unpublished
REBASE ref # 26670
| Sequence length: | GenBank #: | |
| Chromosome: | 5,416,268 bp | CP029437 |
| plasmid pCAV2013-156: | 155,523 bp | CP029435 |
| plasmid pKPC_CAV2013: | 447,095 bp | CP029436 |
REBASE acronym: Kqu2013
Org_num: 29215
All begin DKC09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCAV2013-156 | ||||
| 1210 | ISL3 family transposase | |||
| 1215 | R | Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | Kqu2013ORF1225P |
| 1220 | S | S.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | S.Kqu2013ORF1225P |
| 1225 | M | M.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | M.Kqu2013ORF1225P |
| 1230 | resolvase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6485 | endonuclease | |||
| 6490 | M | M.Kqu9067ORF15695P (100% identity) | M.Kqu2013ORF6490P | |
| 6495 | 75 aa hypothetical protein | |||
| 7220 | 86 aa hypothetical protein | |||
| 7225 | M | M.Kqu2018ORF29640P (100% identity) | M.Kqu2013ORF7225P | |
| 7230 | TrmB family transcriptional regulator | |||
| 7260 | SOS-response repressor and protease LexA | |||
| 7265 | M | M.Kqu2018ORF29600P (100% identity) | M.Kqu2013ORF7265P | |
| 7270 | phage N-6-adenine-methyltransferase | |||
| 19245 | cell division protein DamX | |||
| 19250 | M | M.KvaHKUDamP (100% identity) | GATC | M.Kqu2013DamP |
| 19255 | ribulose-phosphate 3-epimerase | |||
| 20980 | 75 aa hypothetical protein | |||
| 20985 | M | M.Kqu2018ORF15855P (100% identity) | M.Kqu2013ORF20985P | |
| 20990 | replication endonuclease | |||
| 20990 | replication endonuclease | |||
| 20995 | M | M.Kqu2018ORF15845P (100% identity) | M.Kqu2013ORF20995P | |
| 21000 | 62 aa hypothetical protein | |||
| 26630 | DUF4917 domain-containing protein | |||
| 26635 | M | M.Kqu2018ORF10195P (100% identity) | M.Kqu2013ORF26635P | |
| 26640 | 850 aa hypothetical protein | |||
| 26755 | phosphohydrolase | |||
| 26760 | M | M.Kqu9067ORF9170P (100% identity) | CCWGG | M.Kqu2013ORF26760P |
| 26765 | V | V.KquFF21ORF8450P (100% identity) | V.Kqu2013ORF26760P | |
| 26770 | drug/metabolite exporter YedA | |||
| plasmid pKPC_CAV2013 | ||||
| 1575 | 149 aa hypothetical protein | |||
| 1580 | M | M.Sma1978ORFAP (97% identity) | M.Kqu2013ORF1580P | |
| 1585 | 120 aa hypothetical protein | |||
| 3110 | 76 aa hypothetical protein | |||
| 3115 | M | M.Sen3039ORF24445P (100% identity) | M.Kqu2013ORF3115P | |
| 3120 | DNA polymerase III subunit beta | |||
| 3765 | IS1 family transposase | |||
| 3770 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kqu2013ORF3770P |
| 3775 | R | YpsR1ORFAP (99% identity) | CCWGG | Kqu2013ORF3770P |
| 3780 | resolvase | |||
| 3935 | 158 aa hypothetical protein | |||
| 3940 | M | M.YrupYR1ORFCP (100% identity) | M.Kqu2013ORF3940P | |
| 3945 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKPC_CAV2013 | ||||
| 3035 | DNA methylase | |||
| 3040 | R | Kqu2018ORF4320P (100% identity) | Kqu2013ORF3035P | |
| 3045 | inovirus Gp2 family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7265 | DNA cytosine methyltransferase | |||
| 7270 | M | M.Kqu2018ORF29595P (100% identity) | M.Kqu2013ORF7270P | |
| 7275 | PerC family transcriptional regulator | |||