Orientia tsutsugamushi |
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Putative Orientia tsutsugamushi RM systems
Ref: Batty,M.E. and Batty M,E. unpublished
REBASE ref # 26552
| Sequence length: | GenBank #: | |
| chromosome I: | 2,254,553 bp | LS398549 |
| chromosome I: | 1,932,116 bp | LS398547 |
| chromosome I: | 2,469,803 bp | LS398548 |
| chromosome I: | 2,319,449 bp | LS398550 |
| chromosome I: | 2,078,193 bp | LS398552 |
REBASE acronym:
Org_num:
All begin KARP_, KATO_, TA686_, UT176_, UT76HP_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 186 | membrane protein | |||
| 187 | M | DNA methyltransferase | M.Ots686ORF187P | |
| 188 | ATP-binding protein | |||
| 432 | ATP-binding protein | |||
| 433 | M | M.Ots686ORF1277P (100% identity) | M.Ots686ORF433P | |
| 434 | membrane protein | |||
| 494 | membrane protein | |||
| 495 | M | M.Ots2014ORF3455P (98% identity) | M.Ots686ORF495P | |
| 496 | Uncharacterised protein | |||
| 570 | membrane protein | |||
| 571 | M | M.Ots686ORF886P (100% identity) | M.Ots686ORF571P | |
| 572 | Uncharacterised protein | |||
| 885 | membrane protein | |||
| 886 | M | M.Ots686ORF571P (100% identity) | M.Ots686ORF886P | |
| 887 | Uncharacterised protein | |||
| 934 | ATP-binding protein | |||
| 935 | M | M.Ots686ORF886P (99% identity) | M.Ots686ORF935P | |
| 936 | membrane protein | |||
| 1276 | ATP-binding protein | |||
| 1277 | M | M.Ots686ORF433P (100% identity) | M.Ots686ORF1277P | |
| 1278 | membrane protein | |||
| 1315 | ATP-binding protein | |||
| ??? | M | M.OtsKatoORF31P (100% identity) | M.Ots686ORF1316P | |
| 1317 | membrane protein | |||
| 1452 | replicative DNA helicase | |||
| 1453 | M | M.OtsGORF2037P (84% identity) | M.Ots686ORF1453P | |
| 1454 | Uncharacterised protein | |||
| 1515 | membrane protein | |||
| 1516 | M | M.Ots686ORF886P (100% identity) | M.Ots686ORF1516P | |
| 1517 | Uncharacterised protein | |||
| 1618 | ATP-binding protein | |||
| 1619 | M | M.OtsKatoORF1649P (95% identity) | M.Ots686ORF1619P | |
| 1620 | Uncharacterised protein | |||
| 1687 | Uncharacterised protein | |||
| 1688 | M | M.OtsGORF2037P (41% identity) | M.Ots686ORF1688P | |
| 1689 | transposase | |||
| 2174 | ATP-binding protein | |||
| 2175 | M | DNA methyltransferase | M.Ots686ORF2175P | |
| 2176 | Uncharacterised protein | |||
| 2242 | Uncharacterised protein | |||
| 2243 | M | M.Ots686ORF886P (100% identity) | M.Ots686ORF2243P | |
| 2244 | membrane protein | |||
| 2457 | ATP-binding protein | |||
| 2458 | M | M.OtssGORF948P (99% identity) | M.Ots686ORF2458P | |
| 2459 | membrane protein | |||
| chromosome I | ||||
| 84 | Uncharacterised protein | |||
| 85 | M | M.OtsUT76ORF3791P (100% identity) | M.Ots176ORF85P | |
| 86 | membrane protein | |||
| 251 | ATP-binding protein | |||
| 252 | M | M.OtssGORF948P (99% identity) | M.Ots176ORF252P | |
| 253 | membrane protein | |||
| 367 | IS630 family transposase | |||
| 368 | M | DNA methyltransferase | M.Ots176ORF368P | |
| 369 | membrane protein | |||
| 469 | membrane protein | |||
| 470 | M | M.OtsKarpORF1824P (100% identity) | M.Ots176ORF470P | |
| 471 | ATP-binding protein | |||
| 581 | IS630 family transposase | |||
| 582 | M | M.OtsUT76ORF2003P (100% identity) | M.Ots176ORF582P | |
| 583 | ATP-binding protein | |||
| 836 | ATP-binding protein | |||
| 837 | M | M.OtsUT76ORF3602P (100% identity) | M.Ots176ORF1931P | |
| 838 | membrane protein | |||
| 880 | IS630 family transposase | |||
| 881 | M | M.OtsUT76ORF3791P (100% identity) | M.Ots176ORF881P | |
| 882 | membrane protein | |||
| 991 | Uncharacterised protein | |||
| 992 | M | M.Ots716ORF1436P (99% identity) | M.Ots176ORF992P | |
| 993 | membrane protein | |||
| 1025 | ATP-binding protein | |||
| 1026 | M | M.OtsUT76ORF3602P (100% identity) | M.Ots176ORF1026P | |
| 1027 | membrane protein | |||
| 1222 | IS630 family transposase | |||
| 1223 | M | M.OtsUT76ORF3072P (100% identity) | M.Ots176ORF1223P | |
| 1224 | membrane protein | |||
| 1254 | IS630 family transposase | |||
| 1255 | M | M.OtsUT76ORF3791P (100% identity) | M.Ots176ORF1255P | |
| 1256 | membrane protein | |||
| 1615 | ATP-binding protein | |||
| ??? | M | M.OtsKatoORF1649P (100% identity) | M.Ots176ORF1616P | |
| 1617 | Uncharacterised protein | |||
| 1765 | membrane protein | |||
| 1766 | M | M.Ots76ORF1247P (99% identity) | M.Ots176ORF1766P | |
| 1767 | Uncharacterised protein | |||
| 1980 | membrane protein | |||
| 1981 | M | M.OtssGORF2245P (100% identity) | M.Ots176ORF1981P | |
| 1982 | ATP-binding protein | |||
| chromosome I | ||||
| 23 | ATP-binding protein | |||
| 24 | M | M.OtsKatoORF781P (38% identity) | M.OtsKarpORF24P | |
| 25 | Uncharacterised protein | |||
| 136 | Uncharacterised protein | |||
| ??? | M | M.OtsKaORFUP (100% identity) | M.OtsKarpORF137P | |
| 138 | membrane protein | |||
| 159 | membrane protein | |||
| ??? | M | M.OtsKaORFA1P (100% identity) | M.OtsKarpORF160P | |
| 161 | Uncharacterised protein | |||
| 216 | ATP-binding protein | |||
| 217 | M | M.OtsKarpORF2437P (100% identity) | M.OtsKarpORF217P | |
| 218 | RNA-binding protein | |||
| 393 | ATP-binding protein | |||
| ??? | M | M.OtsKaORFSP (100% identity) | M.OtsKarpORF394P | |
| 395 | membrane protein | |||
| 492 | ATP-binding protein | |||
| ??? | M | M.OtsKaORFAP (100% identity) | M.OtsKarpORF493P | |
| 494 | membrane protein | |||
| 519 | membrane protein | |||
| ??? | M | M.OtsKatoORF31P (100% identity) | M.OtsKarpORF520P | |
| 521 | ATP-binding protein | |||
| 759 | ATP-binding protein | |||
| 760 | M | M.OtsKarpORF217P (100% identity) | M.OtsKarpORF2437P | |
| 761 | RNA-binding protein | |||
| 770 | membrane protein | |||
| ??? | M | M.OtsKatoORF31P (100% identity) | M.OtsKarpORF771P | |
| 772 | ATP-binding protein | |||
| 826 | transposase | |||
| ??? | M | M.OtsKatoORF1649P (100% identity) | M.OtsKarpORF827P | |
| 828 | ATP-binding protein | |||
| 957 | membrane protein | |||
| 958 | M | M.OtsKarpORF2057P (83% identity) | M.OtsKarpORF958P | |
| 959 | Uncharacterised protein | |||
| 1066 | ATP-binding protein | |||
| ??? | M | M.OtsKatoORF449P (100% identity) | M.OtsKarpORF1067P | |
| 1068 | membrane protein | |||
| 1293 | membrane protein | |||
| ??? | M | M.OtsKatoORF449P (100% identity) | M.OtsKarpORF1294P | |
| 1295 | ATP-binding protein | |||
| 1395 | conjugal transfer protein TraC | |||
| 1396 | M | DNA methyltransferase | M.OtsKarpORF1396P | |
| 1397 | Uncharacterised protein | |||
| 1419 | membrane protein | |||
| 1420 | M | M.Ots176ORF470P (100% identity) | M.OtsKarpORF1824P | |
| 1421 | ATP-binding protein | |||
| 1537 | membrane protein | |||
| ??? | M | M.OtsKaORFHP (100% identity) | M.OtsKarpORF1538P | |
| 1539 | ATP-binding protein | |||
| 1642 | membrane protein | |||
| ??? | M | M.OtsKatoORF449P (100% identity) | M.OtsKarpORF1643P | |
| 1644 | IS5 family transposase ISOt6 | |||
| 1688 | ATP-binding protein | |||
| 1689 | M | M.OtsSidoORF86P (100% identity) | M.OtsKarpORF1689P | |
| 1690 | membrane protein | |||
| 1699 | membrane protein | |||
| ??? | M | M.OtsKatoORF1649P (100% identity) | M.OtsKarpORF1700P | |
| 1701 | ATP-binding protein | |||
| 1740 | ATP-binding protein | |||
| 1741 | M | M.OtsKarpORF1949P (100% identity) | M.OtsKarpORF1741P | |
| 1742 | membrane protein | |||
| 1797 | ATP-binding protein | |||
| 1798 | M | M.OtsKarpORF1949P (100% identity) | M.OtsKarpORF1798P | |
| 1799 | membrane protein | |||
| 1884 | ankyrin repeat-containing protein | |||
| ??? | M | M.OtsKaORFRP (100% identity) | M.OtsKarpORF1885P | |
| 1886 | ATP-binding protein | |||
| 1948 | membrane protein | |||
| 1949 | M | M.OtsKarpORF1798P (100% identity) | M.OtsKarpORF1949P | |
| 1950 | ATP-binding protein | |||
| 2056 | membrane protein | |||
| ??? | M | M.OtsKaORFWP (100% identity) | M.OtsKarpORF2057P | |
| 2058 | Uncharacterised protein | |||
| 2454 | membrane protein | |||
| ??? | M | M.OtsKaORFPP (100% identity) | M.OtsKarpORF2455P | |
| 2456 | ATP-binding protein | |||
| 2513 | ankyrin repeat-containing protein | |||
| ??? | M | M.OtsKaORFTP (100% identity) | M.OtsKarpORF2514P | |
| 2515 | membrane protein | |||
| 2554 | membrane protein | |||
| 2555 | M | M.OtsSidoORF86P (100% identity) | M.OtsKarpORF2555P | |
| 2556 | ATP-binding protein | |||
| chromosome I | ||||
| 30 | membrane protein | |||
| ??? | M | M.OtsKarpORF771P (100% identity) | M.OtsKatoORF31P | |
| 32 | ATP-binding protein | |||
| 142 | ATP-binding protein | |||
| 143 | M | M.OtsKatoORF781P (99% identity) | M.OtsKatoORF143P | |
| 144 | membrane protein | |||
| 198 | membrane protein | |||
| 199 | M | M.OtsIORF668P (97% identity) | M.OtsKatoORF199P | |
| 200 | ATP-binding protein | |||
| 246 | membrane protein | |||
| 247 | M | M.Ots76ORF1247P (98% identity) | M.OtsKatoORF247P | |
| 248 | Uncharacterised protein | |||
| 448 | ATP-binding protein | |||
| ??? | M | M.OtsKarpORF1643P (100% identity) | M.OtsKatoORF449P | |
| 450 | membrane protein | |||
| 524 | ankyrin repeat-containing protein | |||
| 525 | M | M.OtsKatoORF865P (99% identity) | M.OtsKatoORF525P | |
| 526 | membrane protein | |||
| 589 | Uncharacterised protein | |||
| 590 | M | M.OtsKatoORF865P (100% identity) | M.OtsKatoORF590P | |
| 591 | membrane protein | |||
| 725 | membrane protein | |||
| 726 | M | M.OtsKatoORF1435P (99% identity) | M.OtsKatoORF726P | |
| 727 | ATP-binding protein | |||
| 780 | ATP-binding protein | |||
| 781 | M | M.OtsKatoORF2149P (100% identity) | M.OtsKatoORF781P | |
| 782 | membrane protein | |||
| 793 | membrane protein | |||
| ??? | M | M.OtsKatoORF781P (98% identity) | M.OtsKatoORF794P | |
| 796 | ATP-binding protein | |||
| 864 | Uncharacterised protein | |||
| 865 | M | M.OtsKatoORF590P (100% identity) | M.OtsKatoORF865P | |
| 866 | membrane protein | |||
| 1196 | ATP-binding protein | |||
| ??? | M | M.OtsKatoORF449P (97% identity) | M.OtsKatoORF1197P | |
| 1199 | ankyrin | |||
| 1234 | membrane protein | |||
| 1235 | M | M.OtssGORF2245P (99% identity) | M.OtsKatoORF1235P | |
| 1236 | ATP-binding protein | |||
| 1434 | membrane protein | |||
| 1435 | M | M.OtsKatoORF726P (99% identity) | M.OtsKatoORF1435P | |
| 1436 | ATP-binding protein | |||
| 1464 | Uncharacterised protein | |||
| 1465 | M | M.OtsIORF441P (100% identity) | M.OtsKatoORF1465P | |
| 1466 | Uncharacterised protein | |||
| 1506 | membrane protein | |||
| 1507 | M | M.OtsKatoORF865P (100% identity) | M.OtsKatoORF1507P | |
| 1508 | Uncharacterised protein | |||
| 1648 | ATP-binding protein | |||
| ??? | M | M.OtsKarpORF827P (100% identity) | M.OtsKatoORF1649P | |
| 1650 | membrane protein | |||
| 1799 | membrane protein | |||
| 1800 | M | M.OtssGORF948P (100% identity) | M.OtsKatoORF1800P | |
| 1801 | ATP-binding protein | |||
| 2054 | ATP-binding protein | |||
| ??? | M | M.OtsIORF1933P (99% identity) | M.OtsKatoORF2055P | |
| 2056 | transposase | |||
| 2148 | ATP-binding protein | |||
| 2149 | M | M.OtsKatoORF781P (100% identity) | M.OtsKatoORF2149P | |
| 2150 | membrane protein | |||
| 2187 | ATP-binding protein | |||
| 2188 | M | M.OtsIORF1885P (99% identity) | M.OtsKatoORF2188P | |
| 2189 | membrane protein | |||
| 2287 | membrane protein | |||
| 2288 | M | M.Ots144ORF552P (97% identity) | M.OtsKatoORF2288P | |
| 2289 | ATP-binding protein | |||
| chromosome I | ||||
| 10 | transposase | |||
| ??? | M | M.OtsUT76ORF3376P (100% identity) | M.Ots76ORF11P | |
| 12 | transposase | |||
| 34 | ATP-binding protein | |||
| ??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF35P | |
| 37 | membrane protein | |||
| 92 | ATP-binding protein | |||
| 93 | M | M.OtsUT76ORF2015P (100% identity) | M.Ots76ORF93P | |
| 94 | ATP-binding protein | |||
| 168 | membrane protein | |||
| ??? | M | M.OtsKatoORF31P (100% identity) | M.Ots76ORF169P | |
| 170 | ATP-binding protein | |||
| 194 | membrane protein | |||
| 195 | M | M.OtssGORF948P (99% identity) | M.Ots76ORF2074P | |
| 196 | ATP-binding protein | |||
| 221 | membrane protein | |||
| 222 | M | M.OtssGORF948P (97% identity) | M.Ots76ORF222P | |
| 223 | Uncharacterised protein | |||
| 238 | membrane protein | |||
| ??? | M | M.OtsKarpORF1538P (100% identity) | M.Ots76ORF239P | |
| 240 | ATP-binding protein | |||
| 299 | ATP-binding protein | |||
| ??? | M | M.OtsKatoORF31P (100% identity) | M.Ots76ORF300P | |
| 301 | membrane protein | |||
| 355 | membrane protein | |||
| 356 | M | M.Ots76ORF646P (99% identity) | M.Ots76ORF356P | |
| 357 | Uncharacterised protein | |||
| 645 | Uncharacterised protein | |||
| 646 | M | M.Ots76ORF356P (99% identity) | M.Ots76ORF646P | |
| 647 | membrane protein | |||
| 672 | Uncharacterised protein | |||
| 673 | M | M.OtsUT76ORF2369P (100% identity) | M.Ots76ORF673P | |
| 674 | membrane protein | |||
| 947 | ATP-binding protein | |||
| ??? | M | M.OtsKarpORF1538P (100% identity) | M.Ots76ORF948P | |
| 949 | membrane protein | |||
| 1024 | membrane protein | |||
| ??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1025P | |
| 1027 | ATP-binding protein | |||
| 1141 | ATP-binding protein | |||
| ??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1142P | |
| 1144 | membrane protein | |||
| 1178 | membrane protein | |||
| 1179 | M | M.OtsUT76ORF1552P (100% identity) | M.Ots76ORF1179P | |
| 1180 | ATP-binding protein | |||
| 1246 | membrane protein | |||
| 1247 | M | M.Ots763ORF2312P (77% identity) | M.Ots76ORF1247P | |
| 1248 | Uncharacterised protein | |||
| 1433 | membrane protein | |||
| ??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1434P | |
| 1436 | ATP-binding protein | |||
| 1534 | ATP-binding protein | |||
| ??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1535P | |
| 1537 | membrane protein | |||
| 1771 | ATP-binding protein | |||
| ??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1772P | |
| 1774 | membrane protein | |||
| 2001 | transposase | |||
| ??? | M | M.OtsUT76ORF3376P (100% identity) | M.Ots76ORF2002P | |
| 2003 | transposase | |||
| 2182 | RNA-binding protein | |||
| 2183 | M | M.OtsUT76ORF2118P (100% identity) | M.Ots76ORF2183P | |
| 2184 | ATP-binding protein | |||