Escherichia coli O103 RM8385 |
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Putative Escherichia coli O103 RM8385 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 26546
| Sequence length: | GenBank #: | |
| Chromosome: | 5,631,913 bp | CP028112 |
| plasmid pRM8385-1: | 94,220 bp | CP028113 |
REBASE acronym: Eco8385
Org_num: 29091
All begin I3Q_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30125 | endoribonuclease SymE | |||
| 30130 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco8385I |
| ??? | M | M.EcoO26ORF5541P (100% identity) | TACNNNNNNNRTRTC | M.Eco8385I |
| 30140 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco8385IP |
| 30145 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4040 | recombination protein NinB | |||
| 4045 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco8385ORF4045P |
| 4050 | NinE family protein | |||
| 5970 | HD domain-containing protein | |||
| 5975 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco8385DcmP |
| 5980 | V | V.SflSTLE3DcmP (100% identity) | V.Eco8385DcmP | |
| 5985 | drug/metabolite exporter YedA | |||
| 6975 | DUF977 domain-containing protein | |||
| 6980 | M | M.Sen58011ORF9805P (100% identity) | M.Eco8385ORF6980P | |
| 6985 | 609 aa hypothetical protein | |||
| 19215 | LexA family transcriptional regulator | |||
| 19220 | M | M.EcoSTEC508ORF5750P (100% identity) | GATC | M.Eco8385ORF19220P |
| 19225 | PerC family transcriptional regulator | |||
| 22870 | Fis family transcriptional regulator | |||
| 22875 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco8385ORF22875P |
| 22880 | DUF2556 domain-containing protein | |||
| 23475 | ribulose-phosphate 3-epimerase | |||
| 23480 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco8385DamP |
| 23485 | protein DamX | |||
| 26660 | replication protein A | |||
| 26665 | M | M.SflFF38ORF15P (100% identity) | M.Eco8385ORF26665P | |
| 26670 | 329 aa hypothetical protein | |||
| 27730 | PerC family transcriptional regulator | |||
| 27735 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco8385ORF27735P |
| 27740 | LexA family transcriptional regulator | |||
| plasmid pRM8385-1 | ||||
| 30685 | 72 aa hypothetical protein | |||
| 30690 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco8385ORF30690P |
| 30695 | 0 aa hypothetical protein | |||