Escherichia coli H8Ecoli |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli H8Ecoli RM systems
Ref: Zheng,B. unpublished
REBASE ref # 23767
| Sequence length: | GenBank #: | |
| Chromosome: | 4,743,004 bp | CP029212 |
| plasmid p2-H8: | 124,242 bp | CP029213 |
| plasmid p3-H8: | 95,649 bp | CP029214 |
| plasmid pMCR-H8: | 203,941 bp | CP029215 |
REBASE acronym: EcoH8E
Org_num: 29102
All begin DEP49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21015 | 322 aa hypothetical protein | |||
| 21020 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoH8EORF21025P |
| 21025 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoH8EORF21025P |
| ??? | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoH8EORF21025P |
| 21040 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH8EDamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 domain-containing protein | |||
| 2390 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoH8EORF2390P |
| 2395 | Fis family transcriptional regulator | |||
| 9605 | phosphohydrolase | |||
| 9610 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.EcoH8EDcmP |
| 9615 | V | V.Ecos53DcmP (100% identity) | V.EcoH8EDcmP | |
| 9620 | drug/metabolite exporter YedA | |||
| plasmid p2-H8 | ||||
| 24695 | 73 aa hypothetical protein | |||
| 24700 | M | M.Sso11ORF329P (100% identity) | M.EcoH8EORF24700P | |
| 24705 | 101 aa hypothetical protein | |||
| plasmid p3-H8 | ||||
| 25465 | 101 aa hypothetical protein | |||
| 25470 | M | M.SflN92ORF24820P (100% identity) | M.EcoH8EORF25470P | |
| 25475 | 73 aa hypothetical protein | |||
| plasmid pMCR-H8 | ||||
| 26465 | DUF1173 domain-containing protein | |||
| 26470 | M | M.YpsF1ORFCP (100% identity) | M.EcoH8EORF26470P | |
| 26475 | thermonuclease family protein | |||
| 26930 | 108 aa hypothetical protein | |||
| 26935 | M | M.YpsF1ORFBP (100% identity) | M.EcoH8EORF26935P | |
| 26940 | 202 aa hypothetical protein | |||
| 27035 | DNA-binding protein | |||
| 27040 | M | M.YpsF1ORFDP (100% identity) | M.EcoH8EORF27040P | |
| 27045 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21270 | HNH endonuclease | |||
| 21275 | R | SflN101McrBP (100% identity) | EcoH8EMcrBP | |
| 21280 | R | SflN101McrCP (100% identity) | EcoH8EMcrCP | |
| 21285 | 128 aa hypothetical protein | |||