Escherichia coli H9Ecoli |
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Putative Escherichia coli H9Ecoli RM systems
Ref: Zheng,B. unpublished
REBASE ref # 23767
| Sequence length: | GenBank #: | |
| Chromosome: | 4,722,506 bp | CP029180 |
| plasmid p1-H9: | 145,524 bp | CP029181 |
REBASE acronym: EcoH9E
Org_num: 29101
All begin DEF50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11675 | 540 aa hypothetical protein | |||
| 11680 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoH9EORF11685P |
| 11685 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoH9EORF11685P |
| 11690 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoH9EORF11685P |
| 11695 | 65 aa hypothetical protein | |||
| plasmid p1-H9 | ||||
| 25625 | type II toxin-antitoxin system | |||
| 25630 | M | M.EcosS142ORF43560P (100% identity) | M.EcoH9EORF25630P | |
| ??? | S | S.Efe41C23ORF10175P (49% identity) | S1.EcoH9EORF25630P | |
| ??? | S | S1.Efe44C21ORF22625P (48% identity) | S2.EcoH9EORF25630P | |
| 25640 | R | Efe44C21ORF22625P (100% identity) | EcoH9EORF25630P | |
| 25645 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 675 | recombination protein NinB | |||
| 680 | M | M.EcoXH992ORF25315P (100% identity) | GATC | M.EcoH9EORF680P |
| 685 | NinE family protein | |||
| 1185 | phosphohydrolase | |||
| 1190 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoH9EDcmP |
| 1195 | V | V.SsoSE61DcmP (100% identity) | V.EcoH9EDcmP | |
| 1200 | drug/metabolite exporter YedA | |||
| 11055 | 66 aa hypothetical protein | |||
| 11060 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoH9EORF11060P |
| 11065 | XRE family transcriptional regulator | |||
| 13645 | Fis family transcriptional regulator | |||
| 13650 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoH9EORF13650P |
| 13655 | DUF2556 domain-containing protein | |||
| 14285 | ribulose-phosphate 3-epimerase | |||
| 14290 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoH9EDamP |
| 14295 | protein DamX | |||
| 17170 | replication endonuclease | |||
| 17175 | M | M.SflFF38ORF15P (100% identity) | M.EcoH9EORF17175P | |
| 17180 | 329 aa hypothetical protein | |||
| 21205 | cell division protein ZapA | |||
| 21210 | M | M.Eal161ORF19180P (99% identity) | M.EcoH9EORF21210P | |
| 21215 | DUF1317 domain-containing protein | |||
| 23450 | 4-phosphoerythronate dehydrogenase | |||
| 23455 | M | M.Sen7113ORF20540P (100% identity) | M.EcoH9EORF23455P | |
| 23460 | Com family DNA-binding transcriptional | |||