Lactobacillus plantarum LQ80 |
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Putative Lactobacillus plantarum LQ80 RM systems
Ref: Moriya,N. et al. unpublished
REBASE ref # 27191
| Sequence length: | GenBank #: | |
| Chromosome: | 3,230,192 bp | CP028977 |
| plasmid pLQ802: | 58,027 bp | CP028979 |
REBASE acronym: LplLQ80
Org_num: 29062
All begin LpLQ80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4150 | M1 family peptidase | |||
| 4155 | R | LplZX028ORF4070P (100% identity) | GAAYNNNNNNTAYC | LplLQ80IIP |
| 4160 | M | M.LplZX028ORF4070P (100% identity) | GAAYNNNNNNTAYC | M.LplLQ80II |
| 4165 | S | S1.LplDORF3840P (100% identity) | GRTANNNNNNRTTC | S1.LplLQ80II |
| 4170 | site-specific integrase | |||
| 4175 | S | S2.LplDORF3840P (100% identity) | S2.LplLQ80II | |
| 4180 | S | S3.LplDORF3840P (100% identity) | S3.LplLQ80II | |
| 4185 | histidine phosphatase family protein | |||
| 5100 | XRE family transcriptional regulator | |||
| 5105 | M | M.LplIRG1ORF4920P (100% identity) | GGANNNNNNTTTA | M.LplLQ80I |
| 5110 | S | S.LplYC41ORFAP (100% identity) | GGANNNNNNTTTA | S.LplLQ80I |
| 5115 | R | LplYC41ORFAP (100% identity) | GGANNNNNNTTTA | LplLQ80IP |
| 5120 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLQ802 | ||||
| 16325 | 374 aa hypothetical protein | |||
| 16330 | R | LplBNH17ORF16380P (100% identity) | LplLQ80ORF16335P | |
| 16335 | M | M2.Lbr521ORFBP (100% identity) | GATC | M1.LplLQ80ORF16335P |
| 16340 | M | M2.LplBNH17ORF16380P (100% identity) | GATC | M2.LplLQ80ORF16335P |
| 16345 | IS3-like element IS1163 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7975 | LysR family transcriptional regulator | |||
| 7980 | R | Lpr5300MrrP (100% identity) | LplLQ80MrrP | |
| 7985 | NADP oxidoreductase | |||