Clostridioides difficile CD161 |
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Putative Clostridioides difficile CD161 RM systems
Ref: Su,H. unpublished
REBASE ref # 26528
| Sequence length: | GenBank #: | |
| Chromosome: | 4,295,210 bp | CP029154 |
| plasmid unnamed1: | 130,529 bp | CP029155 |
| plasmid unnamed2: | 48,594 bp | CP029156 |
REBASE acronym: Cdi161
Org_num: 29046
All begin DDG63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16415 | DUF262 domain-containing protein | |||
| 16420 | R | PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | Cdi161ORF16445P |
| 16425 | 142 aa hypothetical protein | |||
| 16430 | nucleotidyltransferase domain-containing | |||
| 16435 | 102 aa hypothetical protein | |||
| 16440 | S | S.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | S.Cdi161ORF16445P |
| 16445 | M | M.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | M.Cdi161ORF16445P |
| 16450 | ketose-bisphosphate aldolase | |||
| 16965 | 111 aa hypothetical protein | |||
| 16970 | R | PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | Cdi161ORF16995P |
| 16975 | 300 aa hypothetical protein | |||
| 16980 | 106 aa hypothetical protein | |||
| 16985 | 150 aa hypothetical protein | |||
| 16990 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi161ORF16995P |
| 16995 | M | M.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | M.Cdi161ORF16995P |
| 17000 | 159 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14565 | RusA family crossover junction | |||
| 14570 | M | M.Pdi630ORF9350P (99% identity) | TGGCCA | M.Cdi161ORF14570P |
| 14575 | 37 aa hypothetical protein | |||
| 14620 | 231 aa hypothetical protein | |||
| 14625 | M | M.CdiS122ORF7470P (94% identity) | M.Cdi161ORF14625P | |
| 14630 | 111 aa hypothetical protein | |||
| 15105 | patatin-like phospholipase family protein | |||
| 15110 | M | M.PdiBJ08ORFCP (100% identity) | CAAAAA | M.Cdi161ORF15110P |
| 15115 | Rrf2 family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 20755 | 297 aa hypothetical protein | |||
| 20760 | RM | Cdi21366III (99% identity) | RGAAAGR | Cdi161ORF20760P |
| 20765 | SHOCT domain-containing protein | |||
| 20920 | 127 aa hypothetical protein | |||
| 20925 | M | M.Pph1296ORF60P (99% identity) | M.Cdi161ORF20925P | |
| 20930 | site-specific DNA-methyltransferase | |||
| 20925 | SsmT | |||
| 20930 | M | M.CdiAKORF19810P (99% identity) | M.Cdi161ORF20930P | |
| 20935 | 266 aa hypothetical protein | |||
| 21025 | 81 aa hypothetical protein | |||
| 21030 | M | M.Cdi92ORFAP (96% identity) | M.Cdi161ORF21030P | |
| 20275 | 0 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 21230 | CopY family transcriptional regulator | |||
| 21235 | M | M.CdiT4ORF19985P (100% identity) | M.Cdi161ORF21235P | |
| 21240 | cell wall hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11190 | AAA family ATPase | |||
| 11195 | R | PdiBJ08McrCP (100% identity) | Cdi161McrCP | |
| 11200 | R | PdiBJ08McrBP (100% identity) | Cdi161McrBP | |
| 11205 | cell division protein | |||