Clostridioides difficile CDT4 |
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Putative Clostridioides difficile CDT4 RM systems
Ref: Su,H. unpublished
REBASE ref # 26528
| Sequence length: | GenBank #: | |
| Chromosome: | 4,240,954 bp | CP029152 |
| plasmid unnamed1: | 48,594 bp | CP029153 |
REBASE acronym: CdiT4
Org_num: 29047
All begin DDG61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16385 | DUF262 domain-containing protein | |||
| 16390 | R | PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | CdiT4ORF16415P |
| 16395 | 142 aa hypothetical protein | |||
| 16400 | nucleotidyltransferase domain-containing | |||
| 16405 | 102 aa hypothetical protein | |||
| 16410 | S | S.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | S.CdiT4ORF16415P |
| 16415 | M | M.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | M.CdiT4ORF16415P |
| 16420 | ketose-bisphosphate aldolase | |||
| 16935 | 111 aa hypothetical protein | |||
| 16940 | R | PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | CdiT4ORF16965P |
| 16945 | 300 aa hypothetical protein | |||
| 16950 | 106 aa hypothetical protein | |||
| 16955 | 150 aa hypothetical protein | |||
| 16960 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.CdiT4ORF16965P |
| 16965 | M | M.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | M.CdiT4ORF16965P |
| 16970 | 159 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15075 | patatin-like phospholipase family protein | |||
| 15080 | M | M.PdiBJ08ORFCP (100% identity) | CAAAAA | M.CdiT4ORF15080P |
| 15085 | Rrf2 family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 19980 | CopY family transcriptional regulator | |||
| 19985 | M | M.CdiSHORF19525P (100% identity) | M.CdiT4ORF19985P | |
| 19990 | cell wall hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11610 | AAA family ATPase | |||
| 11615 | R | PdiBJ08McrCP (100% identity) | CdiT4McrCP | |
| 11620 | R | PdiBJ08McrBP (100% identity) | CdiT4McrBP | |
| 11625 | cell division protein | |||