Rhodococcus ruber SD3 |
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Putative Rhodococcus ruber SD3 RM systems
Ref: Peng,R. and Fan,X. unpublished
REBASE ref # 26539
Complete sequence: 5,366,612 bp
GenBank #: CP029146
REBASE acronym: RruSD3
Org_num: 29070
All begin DCN13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21940 | 453 aa hypothetical protein | |||
| 21945 | R | RruC1ORF24360P (99% identity) | RruSD3ORF21945P | |
| 21950 | 160 aa hypothetical protein | |||
| 22030 | 268 aa hypothetical protein | |||
| 22035 | S | S.Rru4ORFAP (83% identity) | S.RruSD3ORF22040P | |
| ??? | M | M.Rru4ORFAP (100% identity) | M.RruSD3ORF22040P | |
| 22050 | 304 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1455 | permease | |||
| 1460 | V | V.RspAHZY2ORF25790P (99% identity) | V.RruSD3ORF1465P | |
| ??? | M | M.RruYYLORF25000P (100% identity) | M.RruSD3ORF1465P | |
| 1470 | 82 aa hypothetical protein | |||
| 7985 | HNH endonuclease | |||
| 7990 | M | M.RspRDE2DndAP (95% identity) | M.RruSD3DndAP | |
| 7995 | DNA sulfur modification protein DndB | |||
| 7990 | cysteine desulfurase DndA | |||
| 7995 | M | M.RspZ13DndBP (87% identity) | M.RruSD3DndBP | |
| 8000 | DNA phosphorothioation system sulfurtransferase | |||
| 7995 | DNA sulfur modification protein DndB | |||
| 8000 | M | M.RspRDE2DndCP (98% identity) | M.RruSD3DndCP | |
| 8005 | DNA sulfur modification protein DndD | |||
| 8000 | DNA phosphorothioation system sulfurtransferase | |||
| 8005 | M | M.RspRDE2DndDP (95% identity) | M.RruSD3DndDP | |
| 8010 | DNA sulfur modification protein DndE | |||
| 8005 | DNA sulfur modification protein DndD | |||
| 8010 | M | M.RspRDE2DndEP (96% identity) | M.RruSD3DndEP | |
| 8015 | DNA phosphorothioation-associated putative | |||