Escherichia coli AR434 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli AR434 RM systems
Ref: Benahmed,F.H. et al. unpublished
REBASE ref # 26226
| Sequence length: | GenBank #: | |
| Chromosome: | 4,695,904 bp | CP029122 |
| plasmid unnamed1: | 97,471 bp | CP029123 |
REBASE acronym: EcoAR434
Org_num: 29013
All begin CSC21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1448 | transposase | |||
| ??? | R | Sen12509ORF5865P (100% identity) | EcoAR434ORF1451P | |
| 1450 | S | S.Sen12509ORF5865P (100% identity) | S.EcoAR434ORF1451P | |
| 1451 | M | M.SenS688ORF13495P (100% identity) | M.EcoAR434ORF1451P | |
| 1452 | repB plasmid partitioning family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 653 | protein DamX | |||
| 654 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAR434DamP |
| 655 | ribulose-phosphate 3-epimerase | |||
| 781 | 37 aa hypothetical protein | |||
| 782 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoAR434ORF782P |
| 783 | bacterial regulatory, Fis family protein | |||
| 2140 | 231 aa hypothetical protein | |||
| 2141 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoAR434Dcm2P |
| 2142 | V | V.SsoSE61DcmP (100% identity) | V.EcoAR434Dcm2P | |
| 2143 | 306 aa hypothetical protein | |||
| 4538 | lysis S family protein | |||
| 4539 | M | M.Sso63633ORF22290P (100% identity) | M.EcoAR434ORF4539P | |
| 4540 | 72 aa hypothetical protein | |||
| 4547 | lexA DNA binding domain protein | |||
| 4548 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoAR434ORF4548P |
| 4549 | perC transcriptional activator family protein | |||
| plasmid unnamed1 | ||||
| 4719 | 137 aa hypothetical protein | |||
| 4720 | M | M.Vch11614ORFCP (100% identity) | M.EcoAR434ORF4720P | |
| 4721 | 64 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2945 | 55 aa hypothetical protein | |||
| 2946 | R | EcosEC27McrCP (100% identity) | EcoAR434McrCP | |
| 2947 | R | EcoteDMcrBP (92% identity) | EcoAR434McrBP | |
| 2948 | transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3263 | bacteriophage replication protein A | |||
| 3264 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoAR434ORF3264P |
| 3265 | phage/conjugal plasmid C-4 type zinc finger, | |||