Neisseria gonorrhoeae FA 1090 |
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Putative Neisseria gonorrhoeae FA 1090 RM systems
Ref: Lewis,L.A. et al. unpublished
REBASE ref # 8909
Complete sequence: 2,153,922 bp
GenBank #: AE004969 (NC_002946)
REBASE acronym: NgoA
Org_num: 1851
All begin NGO, NGO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 403 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 404 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNNTGC | M.NgoAV |
| 405 | damage-inducible protein D | |||
| 2155 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoAV |
| ??? | S | restriction endonuclease subunit S | GCANNNNNNNNTGC | S2.NgoAVP |
| 407 | R | NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | NgoAV |
| 408 | Clp protease ClpX | |||
| 403 | ADP-L-glycero-D-mannoheptose epimerase | |||
| 404 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoAV-1 | |
| 405 | DNA damage inducible protein | |||
| ??? | type i restriction enzyme EcoR124II specificity protein | |||
| 407 | R | NgoN160ORF2075P (100% identity) | NgoAV-1 | |
| 408 | ATP-dependent C1p protease | |||
| 696 | recombination factor protein RarA | |||
| 697 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | NgoAXVIIP |
| 698 | 77 aa hypothetical protein | |||
| 699 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoAXVII |
| 700 | membrane protein | |||
| 701 | 280 aa hypothetical protein | |||
| 702 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.NgoAXVII |
| 3690 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucine--tRNA ligase | |||
| 7 | R | NgoSW0274ORF40P (100% identity) | GATC | NgoAVI |
| 8 | DNA methylase | |||
| 7 | restriction endonuclease | |||
| 8 | M | M.NgoWSORF8P (99% identity) | GATC | M.NgoAXIP |
| 9 | pseudogene | |||
| 299 | phenylalanine--tRNA ligase | |||
| 300 | V | V.NgoWSORF391P (100% identity) | V.NgoAXIII | |
| ??? | M | M.NgoMORF446P (100% identity) | M.NgoAXIIIP | |
| 303 | R | NgoWSORF391P (100% identity) | NgoAXIIIP | |
| 304 | phenylalanyl-tRNA synthetase subunit beta | |||
| 355 | 215 aa hypothetical protein | |||
| 356 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoAVIII |
| 357 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.NgoAVIII |
| 358 | chitinase | |||
| 362 | uroporphyrinogen decarboxylase | |||
| 363 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoAVII | |
| 364 | R | Ngos1291ORF7560P (100% identity) | GCCGC | NgoAVII |
| 365 | M | M.Ngos1291ORF7560P (100% identity) | GCCGC | M.NgoAVII |
| 366 | 85 aa hypothetical protein | |||
| 674 | 3-isopropylmalate dehydrogenase | |||
| 675 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoAXVP |
| 676 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoAXV |
| 677 | 213 aa hypothetical protein | |||
| 872 | anthranilate synthase component I | |||
| 873 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoAIV |
| 874 | R | Ngos1291ORF10080P (99% identity) | GCCGGC | NgoAIV |
| 875 | phosphoribosylaminoimidazole carboxylase | |||
| 6135 | phage protein | |||
| 1173 | V | V.Ngos1291ORF65P (100% identity) | V.NgoAXIV | |
| ??? | R | NgoWSORF1801P (100% identity) | NgoAXIVP | |
| ??? | M | M.NgoN160ORF5915P (100% identity) | CCGG | M.NgoAXIVP |
| 1176 | 48 aa hypothetical protein | |||
| 1207 | excinuclease ABC subunit A | |||
| 1208 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoAIII |
| 1209 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoAIII |
| 1210 | 128 aa hypothetical protein | |||
| 1793 | membrane protein | |||
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoAII |
| 1795 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoAII |
| 1796 | ribosome-recycling factor | |||
| 1891 | 93 aa hypothetical protein | |||
| ??? | R | NgoWFIIP (100% identity) | GGTGA | NgoAXVI |
| 1893 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoAXVI |
| 1894 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoAXVIP |
| 1895 | transcription accessory protein | |||
| 1990 | GTPase CgtA | |||
| 1991 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoAI |
| 1992 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoAI |
| 1993 | cysteinyl-tRNA synthetase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 544 | peptidylprolyl isomerase | |||
| 545 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoAX |
| 546 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoAX |
| 547 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 639 | lactate dehydrogenase | |||
| 640 | R | NgoSH240ORFJP (100% identity) | GCAGA | NgoAXIIP |
| 641 | M | M.NgoSW0015ORF3255P (100% identity) | GCAGA | M.NgoAXII |
| 642 | pseudouridine synthase | |||