Vibrio parahaemolyticus M1-1 |
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Putative Vibrio parahaemolyticus M1-1 RM systems
Ref: Kumar,R. et al. unpublished
REBASE ref # 26014
Contig set: 5,507,741 bp
GenBank #: PDDQ00000000 (NZ_PDDQ00000000)
REBASE acronym: VpaM11
Org_num: 28275
All begin CNR26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5200 | sigma-54-dependent Fis family transcriptional | |||
| 5205 | R | VpaTW01ORF21795P (99% identity) | VpaM11ORF5210P | |
| ??? | M | M.VpaTW01ORF21795P (100% identity) | M.VpaM11ORF5210P | |
| 5215 | S | S.VpaTW01ORF21795P (100% identity) | S.VpaM11ORF5210P | |
| 5220 | 511 aa hypothetical protein | |||
| 18175 | 0 aa hypothetical protein | |||
| 18180 | R | Spu10736IIP (95% identity) | VpaM11ORF18180P | |
| 18185 | 160 aa hypothetical protein | |||
| 9300 | 625 aa hypothetical protein | |||
| ??? | S | S.VpaTW01ORF3235P (100% identity) | S.VpaM11ORF9310P | |
| 9310 | M | M.VpaTW01ORF3235P (100% identity) | M.VpaM11ORF9310P | |
| 9315 | 132 aa hypothetical protein | |||
| 9320 | 36 aa hypothetical protein | |||
| 9325 | 49 aa hypothetical protein | |||
| 9330 | elongation factor Ts | |||
| 9335 | 68 aa hypothetical protein | |||
| 9340 | 94 aa hypothetical protein | |||
| ??? | N6-methyltransferase | |||
| 9345 | site-specific DNA-methyltransferase | |||
| ??? | R | VpaS2ORFBP (100% identity) | VpaM11ORF9310P | |
| 9355 | 806 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16845 | ribulose-phosphate 3-epimerase | |||
| 16850 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaM11DamP |
| 16855 | cell division protein DamX | |||
| 9340 | 94 aa hypothetical protein | |||
| ??? | M | M.VpaS2ORFCP (100% identity) | M.VpaM11ORF9345P | |
| 9350 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20135 | 363 aa hypothetical protein | |||
| 20140 | M | M.VpeOK1ORFIP (91% identity) | M.VpaM11ORF20140P | |
| 20145 | R | VpaHA2ORF24335P (98% identity) | VpaM11ORF20140P | |
| 20150 | 141 aa hypothetical protein | |||
| 3895 | 1293 aa hypothetical protein | |||
| 3900 | R | VpaTW01ORF12755P (100% identity) | VpaM11ORF3905P | |
| 3905 | M | M.VpaTW01ORF12755P (100% identity) | M.VpaM11ORF3905P | |
| 3910 | WYL domain-containing protein | |||