Dethiosulfovibrio salsuginis USBA 82 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Dethiosulfovibrio salsuginis USBA 82 RM systems
Ref: Varghese,N. and Submissions,S. unpublished
REBASE ref # 25906
Contig set: 2,681,495 bp
GenBank #: FXBB00000000 (NZ_FXBB00000000)
REBASE acronym: Dpe82
Org_num: 28192
All begin SAMN06275492_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1298 | NlpC/P60 family protein | |||
| 1299 | RM | HcrSP41ORF205P (73% identity) | Dpe82ORF1299P | |
| 12910 | Glyoxylase, beta-lactamase superfamily II | |||
| 1235 | SNF2 family N-terminal domain-containing | |||
| 1236 | RM | Lco141951ORF30035P (48% identity) | Dpe82ORF1236P | |
| 1237 | PDZ domain (Also known as DHR or GLGF) | |||
| 12813 | Integrase | |||
| 12814 | M | M.Aco12261III (59% identity) | M.Dpe82ORF12814P | |
| 12815 | R | PaqCORF10735P (14% identity) | Dpe82ORF12814P | |
| 12816 | 237 aa hypothetical protein | |||
| 12843 | 61 aa hypothetical protein | |||
| 12844 | M | M.Dca3852ORF5795P (18% identity) | M.Dpe82ORF12844P | |
| 12845 | 230 aa hypothetical protein | |||
| 11453 | 3-deoxy-D-manno-octulosonic-acid transferase | |||
| 11454 | M | M.Dma2077ORF85080P (67% identity) | M.Dpe82ORF11454P | |
| 11455 | R | Sxi21ORF11890P (63% identity) | Dpe82ORF11454P | |
| 11456 | 400 aa hypothetical protein | |||
| 10349 | LysR substrate binding domain-containing | |||
| 10350 | R | Gsp1195ORF2695P (62% identity) | Dpe82ORF10350P | |
| 10351 | DNA (cytosine-5)-methyltransferase 1 | |||
| 10350 | HaeII restriction endonuclease | |||
| 10351 | M | M.PmeBin207ORFDP (60% identity) | M.Dpe82ORF10351P | |
| 10352 | transcriptional regulator, LysR family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 101299 | 61 aa hypothetical protein | |||
| 101300 | R | Asp020ORF8870P (64% identity) | Dpe82ORF101301P | |
| 101301 | M | M.Pst41ORF18235P (43% identity) | M.Dpe82ORF101301P | |
| 101302 | protein of unknown function | |||