Nocardia farcinica CNM20080921 |
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Putative Nocardia farcinica CNM20080921 RM systems
Ref: Valdezate,S. et al. unpublished
REBASE ref # 25832
Contig set: 6,816,082 bp
GenBank #: NXEH00000000 (NZ_NXEH00000000)
REBASE acronym: Nfa468
Org_num: 28123
All begin CJ468_, ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6427 | S | S.Nfa469ORF6392P (100% identity) | S.Nfa468ORF6428P | |
| 6428 | M | 61 aa hypothetical protein | M.Nfa468ORF6428P | |
| 1630 | Lipase 3 | |||
| 1631 | M | M.Nfa469ORF26P (99% identity) | GACNNNNNCTAC | M.Nfa468ORF1631P |
| ??? | S | S.NfaW6977ORF3175P (100% identity) | GACNNNNNCTAC | S.Nfa468ORF1631P |
| 1633 | Mrr restriction system protein | |||
| 1634 | 418 aa hypothetical protein | |||
| 1635 | R | Nfa469ORF26P (93% identity) | GACNNNNNCTAC | Nfa468ORF1631P |
| 1636 | 46 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | RM | Nfa469ORFAP (100% identity) | Nfa468ORFAP | |
| 6291 | 218 aa hypothetical protein | |||
| 6292 | V | V.Nfa469ORF6316P (100% identity) | V.Nfa468ORF6293P | |
| 6293 | M | M.Rrh630ORF4853P (100% identity) | M.Nfa468ORF6293P | |
| 6294 | 166 aa hypothetical protein | |||
| 5861 | 285 aa hypothetical protein | |||
| ??? | M | M.Nsp372ORF29575P (100% identity) | M.Nfa468ORF5862P | |
| 5863 | 83 aa hypothetical protein | |||
| 5195 | 125 aa hypothetical protein | |||
| 5196 | RM | Nfa469ORF5774P (99% identity) | Nfa468ORF5196P | |
| 5197 | 83 aa hypothetical protein | |||
| 5423 | 85 aa hypothetical protein | |||
| 5424 | M | M.NfaW6977ORF25615P (100% identity) | M.Nfa468ORF5424P | |
| 5425 | 343 aa hypothetical protein | |||
| 4884 | 369 aa hypothetical protein | |||
| ??? | M | M.Nfa469ORF5475P (100% identity) | M.Nfa468ORF4885P | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | Probable type I restriction enzyme BthVORF4518P M protein | |||
| ??? | RM | Nfa469ORF5479P (100% identity) | Nfa468ORF4889P | |
| 4890 | 77 aa hypothetical protein | |||
| 4324 | HTH-type transcriptional regulator | |||
| 4325 | M | M.Nfa469ORF5555P (100% identity) | ATCGAT | M.Nfa468ORF4325P |
| 4326 | Nitroreductase NfnB | |||
| 4339 | 81 aa hypothetical protein | |||
| 4340 | R | Nfa469ORF5539P (100% identity) | Nfa468ORF4341P | |
| 4341 | M | M.Nfa469ORF5539P (100% identity) | M.Nfa468ORF4341P | |
| 4342 | 236 aa hypothetical protein | |||
| 4257 | 310 aa hypothetical protein | |||
| 4258 | M | M.NfaW6977ORF29830P (100% identity) | M.Nfa468ORF4258P | |
| 4259 | 234 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1632 | 144 aa hypothetical protein | |||
| 1633 | R | Nfa11134MrrP (99% identity) | Nfa468MrrP | |
| 1634 | 418 aa hypothetical protein | |||