Megasphaera elsdenii indica |
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Putative Megasphaera elsdenii indica RM systems
Ref: Bag,S. et al. unpublished
REBASE ref # 25770
Contig set: 2,429,033 bp
GenBank #: NQMW00000000 (NZ_NQMW00000000)
REBASE acronym: MelIn
Org_num: 27949
All begin CJO36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10390 | sigma-70 family RNA polymerase sigma factor | |||
| 10395 | M | M.MelORF1615P (98% identity) | M.MelInORF10395P | |
| 10400 | S | S.PmeBin99ORFDP (35% identity) | S.MelInORF10395P | |
| 10405 | R | MelORF1615P (98% identity) | MelInORF10395P | |
| 10430 | LysR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9970 | DNA repair protein | |||
| 9975 | R | PmeBin63ORFCP (59% identity) | MelInORF9980P | |
| 9980 | M | M1.Gpu1384ORF1710P (62% identity) | M1.MelInORF9980P | |
| 9985 | M | M1.CbaBL6ORF2896P (67% identity) | M2.MelInORF9980P | |
| 9990 | 82 aa hypothetical protein | |||
| 10155 | 287 aa hypothetical protein | |||
| 10160 | M | M.AspD21ORF59P (95% identity) | M.MelInORF10160P | |
| 10165 | HNH endonuclease | |||
| 4455 | ATP-binding protein | |||
| 4460 | R | PspG3ORF22515P (27% identity) | MelInORF4460P | |
| 4465 | 306 aa hypothetical protein | |||
| 4470 | 694 aa hypothetical protein | |||
| 4475 | V | V.CbaE2008ORF10745P (57% identity) | V.MelInORF4460P | |
| 4480 | DNA (cytosine-5-)-methyltransferase | |||
| 4475 | very short patch repair endonuclease | |||
| 4480 | M | M.LasOA10ORF9145P (61% identity) | M.MelInORF4480P | |
| 4485 | 549 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15 | DUF4268 domain-containing protein | |||
| 20 | M | M.PmeBin172ORFIP (55% identity) | M.MelInORF20P | |
| 25 | R | MheMHORF12280P (91% identity) | MelInORF20P | |
| 30 | 2,5-diketo-D-gluconic acid reductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4920 | (deoxy)nucleoside triphosphate | |||
| 4925 | R | MelORF1373P (98% identity) | MelInORF4925P | |
| 4930 | PIN/TRAM domain-containing protein | |||