Nodularia spumigena UHCC 0039 |
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Putative Nodularia spumigena UHCC 0039 RM systems
Ref: Teikari,J.E. unpublished
REBASE ref # 26402
Complete sequence: 5,294,286 bp
GenBank #: CP020114
REBASE acronym: Nsp0039
Org_num: 28751
All begin BMF81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 596 | translation initiation factor IF-3 | |||
| ??? | M | M.Nsp9414ORF20310P (91% identity) | M.Nsp0039ORFLP | |
| ??? | S | 84 aa hypothetical protein AN484_07620 | S.Nsp0039ORFLP | |
| ??? | R | Nsp9414ORF20310P (99% identity) | Nsp0039ORFLP | |
| 607 | 122 aa hypothetical protein | |||
| 1222 | nicotinamide-nucleotide amidase | |||
| 1224 | R | Nsp9414ORF12720P (63% identity) | Nsp0039ORF1226P | |
| 1225 | S | S.Pae1TORF230150P (30% identity) | S.Nsp0039ORF1226P | |
| 1226 | M | M.Nsp0038ORF2979P (98% identity) | M.Nsp0039ORF1226P | |
| 1227 | serine hydroxymethyltransferase | |||
| 2275 | methionine--tRNA ligase | |||
| ??? | R | PagC7805ORF2203P (83% identity) | Nsp0039ORFEP | |
| ??? | S | S2.Csp6303ORF1371P (34% identity) | S.Nsp0039ORFEP | |
| ??? | M | M.Nsp596ORF21895P (93% identity) | M.Nsp0039ORFEP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 73 | pyridoxine 5-phosphate synthase | |||
| 75 | R | Nsp9414ORF910P (99% identity) | Nsp0039ORF76P | |
| 76 | M | M.Nsp9414ORF910P (100% identity) | M.Nsp0039ORF76P | |
| 77 | ABC-2 type transport system permease protein | |||
| 93 | 131 aa hypothetical protein | |||
| ??? | RM | Nsp9414ORF1110P (99% identity) | Nsp0039ORFNP | |
| 95 | 158 aa hypothetical protein | |||
| 104 | 68 aa hypothetical protein | |||
| 105 | RM | Pga1313ORF15125P (80% identity) | Nsp0039ORF105P | |
| 109 | hypothetical protein | |||
| ??? | RM | Nsp9414ORFBP (100% identity) | Nsp0039ORFMP | |
| 439 | 105 aa hypothetical protein | |||
| ??? | M | M.Nsp9414ORF7130P (100% identity) | M.Nsp0039ORFAP | |
| 442 | R | Nsp9414ORF7130P (95% identity) | Nsp0039ORFAP | |
| 445 | 129 aa hypothetical protein | |||
| 696 | R | type-2 restriction enzyme AplI | Nsp0039ORF697P | |
| 697 | M | M.Nsp9414ORF19140P (100% identity) | M.Nsp0039ORF697P | |
| 698 | iron(III) transport system ATP-binding protein | |||
| 1158 | 69 aa hypothetical protein | |||
| 1163 | M | M.Nsp596ORF19660P (100% identity) | M.Nsp0039ORF1163P | |
| 1164 | R | Nsp9414ORF11980P (100% identity) | Nsp0039ORF1163P | |
| 1165 | 665 aa hypothetical protein | |||
| 1199 | 68 aa hypothetical protein | |||
| ??? | M | M.Nsp9414ORF21826P (100% identity) | M.Nsp0039ORFBP | |
| 1202 | 160 aa hypothetical protein | |||
| ??? | M | M.Nsp9414ORF32230P (99% identity) | M.Nsp0039ORFKP | |
| 1512 | sugar transferase EpsL | |||
| 1525 | chaperone protein DnaK | |||
| ??? | M | M.Nsp9414ORF13048P (98% identity) | M.Nsp0039ORFCP | |
| 1527 | type-2 restriction enzyme Cfr10I | |||
| 1583 | 183 aa hypothetical protein | |||
| 1585 | M | M.Nsp9414ORF2726P (100% identity) | M.Nsp0039ORF1585P | |
| 1586 | lipid-A-disaccharide synthase | |||
| 1724 | 182 aa hypothetical protein | |||
| ??? | M | M.Nsp9414ORF45510P (93% identity) | M.Nsp0039ORFDP | |
| 1727 | 70 aa hypothetical protein | |||
| 2153 | 203 aa hypothetical protein | |||
| 2154 | M | M.Nsp596ORF5735P (99% identity) | M.Nsp0039ORF2154P | |
| 2155 | R | Nsp9414ORF9100P (96% identity) | Nsp0039ORF2154P | |
| 2338 | HTH-type transcriptional regulator GltC | |||
| ??? | C | C.Nsp9414ORF29830P (100% identity) | C.Nsp0039ORF2341P | |
| ??? | R | Nsp9414ORF29830P (100% identity) | Nsp0039ORF2341P | |
| 2341 | M | M.Nsp0038ORF1831P (96% identity) | M.Nsp0039ORF2341P | |
| 2342 | membrane protein | |||
| 2679 | monoglucosyldiacylglycerol epimerase | |||
| ??? | M | M.Nsp9414ORF11884P (100% identity) | M.Nsp0039ORFFP | |
| 2682 | R | Nsp9414ORF11884P (100% identity) | Nsp0039ORFFP | |
| 2711 | 290 aa hypothetical protein | |||
| 2715 | RM | Nsp0038ORF1468P (80% identity) | Nsp0039ORF2715P | |
| 2719 | ADP-ribose pyrophosphatase | |||
| ??? | RM | Nsp9414ORF20700P (86% identity) | Nsp0039ORFJP | |
| 2764 | Xaa-Pro aminopeptidase | |||
| 2794 | 74 aa hypothetical protein | |||
| ??? | M | M.Nsp9414ORF25570P (97% identity) | M.Nsp0039ORFIP | |
| 2798 | 281 aa hypothetical protein | |||
| ??? | M | M.Nsp9414ORF25000P (100% identity) | M.Nsp0039ORFGP | |
| ??? | R | Nsp9414ORF25000P (100% identity) | Nsp0039ORFGP | |
| 2852 | phycobilisome rod-core linker protein | |||
| 2999 | heat shock protein HtpX | |||
| 3001 | RM | Nsp9414ORF5799P (100% identity) | Nsp0039ORF3001BP | |
| 3002 | 70 aa hypothetical protein | |||
| 3003 | 74 aa hypothetical protein | |||
| 3004 | RM | Lro951ORF32110AP (86% identity) | Nsp0039ORF3001AP | |
| 3005 | nitrogenase iron protein | |||
| 3142 | 532 aa hypothetical protein | |||
| ??? | M | M.NcyWK1DndCP (83% identity) | M.Nsp0039DndCP | |
| ??? | DNA sulfur modification protein DndD | |||
| ??? | DNA phosphorothioation system sulfurtransferase DndC | |||
| ??? | M | M.Nsp0038DndDP (96% identity) | M.Nsp0039DndDP | |
| ??? | 135 aa hypothetical protein NIES806_29090 | |||
| ??? | DNA sulfur modification protein DndD | |||
| ??? | M | M.Nsp0038DndEP (91% identity) | M.Nsp0039DndEP | |
| 3770 | tryptophan--tRNA ligase | |||
| ??? | M | M.Nsp9414ORF50720P (100% identity) | M.Nsp0039ORFHP | |
| 3772 | R | Nsp9414ORF50720P (100% identity) | Nsp0039ORFHP | |
| 3773 | HTH-type transcriptional regulator DdrOP3 | |||
| 4067 | 69 aa hypothetical protein | |||
| 4068 | M | M.Nsp9414ORF41030P (100% identity) | M.Nsp0039ORF4068P | |
| 4069 | 394 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2369 | R | Nsp9414ORF30120P (60% identity) | Nsp0039ORF2370P | |
| 2370 | M | M.Nsp9414ORF30120P (56% identity) | M.Nsp0039ORF2370P | |