Campylobacter concisus P2CDO4 |
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Putative Campylobacter concisus P2CDO4 RM systems
Ref: Liu,F. et al. Emerg Microbes Infect 7 (1) (2018) In press
REBASE ref # 26327
Complete sequence: 1,975,443 bp
GenBank #: CP021642
REBASE acronym: CcoDO4
Org_num: 28388
All begin CCS77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1355 | metal-dependent hydrolase | |||
| 1356 | R | Cco19995ORF1750P (88% identity) | CcoDO4ORF1361P | |
| 1357 | Type I restriction-modification system, | |||
| 1358 | 291 aa hypothetical protein | |||
| 1359 | 173 aa hypothetical protein | |||
| ??? | S | S.CcoP3O1ORF2595P (64% identity) | S.CcoDO4ORF1361P | |
| 1361 | M | M.Cco19995ORF1750P (97% identity) | M.CcoDO4ORF1361P | |
| 1362 | Type I restriction-modification system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 378 | Helicase loader DnaI | |||
| 379 | R | Csh3277ORF2321P (100% identity) | CcoDO4ORF380P | |
| 380 | M | M.Csh3277ORF2321P (100% identity) | M.CcoDO4ORF380P | |
| 381 | 218 aa hypothetical protein | |||
| 402 | Anthranilate synthase, amidotransferase | |||
| 403 | M | M.Cla2308ORFFP (71% identity) | M.CcoDO4ORF403P | |
| 404 | R | Csp13003ORF425P (80% identity) | CcoDO4ORF403P | |
| 405 | Phosphoribosylanthranilate isomerase | |||
| 637 | 306 aa hypothetical protein | |||
| ??? | S | Hci94105ORF1452P (10% identity) | S.CcoDO4ORF638P | |
| 638 | RM | restriction enzyme BcgI alpha chain-like | CcoDO4ORF638P | |
| 639 | Translation elongation factor LepA | |||
| 1954 | 88 aa hypothetical protein | |||
| 1955 | M | M.CcoP11S1ORF10025P (96% identity) | M.CcoDO4ORF1955P | |
| 1956 | S-ribosylhomocysteine lyase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 871 | Beta-hexosaminidase | |||
| 872 | R | CcoP11S1McrCP (59% identity) | CcoDO4McrCP | |
| 873 | R | CcoS1McrBP (77% identity) | CcoDO4McrBP | |
| 874 | 150 aa hypothetical protein | |||