|
Putative Planktothrix agardhii NIES-204 RM systems
Ref: Shimura,Y. et al. unpublished
REBASE ref # 26410
Sequence length: | GenBank #: | |
Chromosome: | 4,780,238 bp | AP017991 |
plasmid plasmid1: | 117,686 bp | AP017992 |
plasmid plasmid2: | 99,115 bp | AP017993 |
plasmid plasmid3: | 52,365 bp | AP017994 |
plasmid plasmid4: | 34,730 bp | AP017995 |
REBASE acronym: Pag204
Org_num: 28763
All begin NIES204_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8250 | 490 aa hypothetical protein | |||
8260 | M | M.Pag2AORF1002P (100% identity) | M.Pag204ORF8260P | |
8270 | prevent-host-death family protein | |||
8280 | nucleotidyltransferase | |||
8290 | 77 aa unknown protein | |||
8300 | 136 aa hypothetical protein | |||
8310 | 65 aa hypothetical protein | |||
8320 | S | S.Pli48BORF13700P (40% identity) | S.Pag204ORF8260P | |
8330 | 71 aa hypothetical protein | |||
8340 | 85 aa hypothetical protein | |||
8350 | 137 aa hypothetical protein | |||
8360 | R | Pag66ORF326P (99% identity) | Pag204ORF8260P | |
8370 | 204 aa hypothetical protein | |||
13400 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
13410 | M | M.Pag7811ORF1264P (100% identity) | M.Pag204ORF13410P | |
13420 | 60 aa hypothetical protein | |||
40530 | acetyl-CoA carboxylase, biotin carboxylase | |||
40540 | R | AplORF6670P (85% identity) | Pag204ORF40580P | |
40550 | 238 aa hypothetical protein | |||
40560 | 382 aa hypothetical protein | |||
40570 | S | S.Afr14755ORFAP (61% identity) | S.Pag204ORF40580P | |
40580 | M | M.SplZORFAP (84% identity) | M.Pag204ORF40580P | |
40600 | 39 aa hypothetical protein | |||
plasmid plasmid2 | ||||
44660 | 371 aa hypothetical protein | |||
44670 | R | PagC7805ORF4457P (56% identity) | Pag204ORF44720P | |
44680 | 203 aa hypothetical protein | |||
44690 | 76 aa hypothetical protein | |||
44700 | 152 aa hypothetical protein | |||
44710 | S | S.Psp741ORF26925P (45% identity) | S.Pag204ORF44720P | |
44720 | M | M.Enu25634ORF13370P (50% identity) | M.Pag204ORF44720P | |
44730 | 182 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
570 | two-component hybrid sensor and regulator | |||
580 | C | C.PagC7805ORF3889P (100% identity) | C.Pag204ORF600P | |
??? | R | PagC7805ORF3889P (99% identity) | Pag204ORF600P | |
600 | M | M.PagC7805ORF3889P (100% identity) | M.Pag204ORF600P | |
610 | 610 aa hypothetical protein | |||
1410 | 562 aa hypothetical protein | |||
1420 | RM | Pag976ORF3194P (99% identity) | Pag204ORF1420P | |
1430 | phycobilisome core-membrane linker polypeptide | |||
1570 | GTP-binding protein | |||
1580 | M | M.Pag2AORF302P (94% identity) | M.Pag204ORF1580P | |
1590 | R | Pag2AORF302P (100% identity) | Pag204ORF1580P | |
1600 | ABC transporter related | |||
1920 | diaminopimelate decarboxylase | |||
1930 | M | M.Pag7811ORF82P (88% identity) | M.Pag204ORF1930P | |
1940 | 31 aa hypothetical protein | |||
2080 | DNA polymerase III, alpha subunit | |||
2090 | M | M.Pag976ORF3278P (99% identity) | M.Pag204ORF2090P | |
2100 | R | Pag1268ORF3496P (100% identity) | Pag204ORF2090P | |
2110 | 440 aa hypothetical protein | |||
6520 | ABC transporter ATP-binding protein | |||
6530 | M | M.Pag7811ORF569P (100% identity) | M.Pag204ORF6530P | |
6540 | uncharacterized protein, fragment | |||
6960 | ABC transporter related | |||
6970 | M | M.PagC7805ORF200P (100% identity) | M.Pag204ORF6970P | |
6980 | 293 aa hypothetical protein | |||
9110 | phosphoribosylamine--glycine ligase | |||
??? | M | M.Pag7805ORF3898P (93% identity) | M.Pag204ORF9120P | |
9150 | 123 aa hypothetical protein | |||
11340 | 241 aa hypothetical protein | |||
11350 | M | M.Pag976ORF4198P (100% identity) | M.Pag204ORF11350P | |
11370 | glycosyl transferase family 39 | |||
11910 | dihydroorotase | |||
11920 | M | M.Pag2AORF1375P (99% identity) | M.Pag204ORF11920P | |
11930 | deoxyribose-phosphate aldolase | |||
12430 | 40 aa hypothetical protein | |||
12440 | RM | Pag7811ORF1166P (98% identity) | Pag204ORF12440P | |
12450 | adenylate cyclase | |||
14390 | 598 aa hypothetical protein | |||
14400 | M | M.Pru7821ORF1769P (100% identity) | M.Pag204ORF14400P | |
14410 | transposase | |||
14420 | 102 aa hypothetical protein | |||
14430 | M | M.Pag7811ORF1364P (99% identity) | M.Pag204ORF14430P | |
14440 | 81 aa hypothetical protein | |||
16500 | glucose inhibited division protein A | |||
16510 | M | M.PagC7805ORF1879P (99% identity) | M.Pag204ORF16510P | |
16520 | glucose inhibited division protein A | |||
17050 | phosphoenolpyruvate synthase | |||
17060 | R | Pag2AORF1872P (100% identity) | Pag204ORF17070P | |
17070 | M | M.Pag365ORF2178P (100% identity) | M.Pag204ORF17070P | |
17080 | 95 aa hypothetical protein | |||
17520 | beta-ketoacyl synthase | |||
17530 | M | M.Pag7811ORF1679P (100% identity) | M.Pag204ORF17530P | |
17540 | 155 aa hypothetical protein | |||
17990 | GTP-binding protein EngA | |||
18000 | RM | Pag365ORF2087P (91% identity) | Pag204ORF18000P | |
18010 | 102 aa hypothetical protein | |||
18120 | 243 aa hypothetical protein | |||
18130 | M | M.Pag976ORF530P (92% identity) | M.Pag204ORF18130P | |
18140 | 56 aa hypothetical protein | |||
19620 | 97 aa hypothetical protein | |||
19630 | RM | Pag2AORF2132P (99% identity) | Pag204ORF19630P | |
19640 | MscS mechanosensitive ion channel family | |||
20600 | two-component response regulator | |||
20610 | M | M.Pag2AORF2230P (100% identity) | M.Pag204ORF20610P | |
??? | R | Pag2AORF2230P (99% identity) | Pag204ORF20610P | |
20640 | 103 aa hypothetical protein | |||
20690 | 74 aa hypothetical protein | |||
20700 | RM | Pag2AORF2239P (98% identity) | Pag204ORF20700P | |
20710 | 116 aa hypothetical protein | |||
23340 | ferredoxin-dependent glutamate synthase | |||
23350 | R | PagC7805ORF1153P (100% identity) | Pag204ORF23370P | |
23360 | 230 aa hypothetical protein | |||
23370 | M | M.PagC7805ORF1153P (100% identity) | M.Pag204ORF23370P | |
23380 | 40 aa hypothetical protein | |||
23720 | 430 aa hypothetical protein | |||
23730 | R | Pag66ORF1864P (100% identity) | Pag204ORF23740P | |
23740 | M | M.Pag2AORF2542P (100% identity) | M.Pag204ORF23740P | |
23750 | beta-Ig-H3/fasciclin | |||
23960 | 55 aa hypothetical protein | |||
23970 | M | M.Pag66ORF1887P (100% identity) | M.Pag204ORF23970P | |
23980 | 91 aa hypothetical protein | |||
24270 | 74 aa hypothetical protein | |||
24280 | M | M.Pag976ORF1171P (97% identity) | M.Pag204ORF24280P | |
24290 | binding-protein-dependent transport systems | |||
24700 | CO2 hydration protein | |||
24710 | RM | Pag976ORF1212P (91% identity) | Pag204ORF24710P | |
24720 | cell growth regulatory protein | |||
25590 | 29 aa hypothetical protein | |||
25600 | RM | Pag2AORF2725P (99% identity) | Pag204ORF25600P | |
25610 | 743 aa hypothetical protein | |||
26440 | 184 aa unknown protein | |||
26450 | M | M.Pag976ORF1392P (100% identity) | M.Pag204ORF26450P | |
26460 | cysteine desulfurase | |||
27810 | ferredoxin-sulfite reductase | |||
27820 | RM | Pag7811ORF2732P (99% identity) | Pag204ORF27820P | |
27830 | anthranilate phosphoribosyltransferase | |||
28680 | ribonuclease D | |||
28690 | M | M.PagC7805ORF630P (100% identity) | M.Pag204ORF28690P | |
28710 | metallophosphoesterase | |||
30290 | 521 aa hypothetical protein | |||
30300 | RM | Pag1268ORF1999P (99% identity) | Pag204ORF30300P | |
30310 | TPR domain protein | |||
30380 | 59 aa hypothetical protein | |||
30390 | R | Pag7811ORF2989P (71% identity) | Pag204ORF30400P | |
30400 | M | M.Pag7805ORF1739P (99% identity) | M.Pag204ORF30400P | |
30410 | methyltransferase type 11 | |||
30780 | fibrillin | |||
??? | R | Pag7805ORF1710P (100% identity) | Pag204ORF30800P | |
??? | M | M.Pag1268ORF2052P (99% identity) | M.Pag204ORF30800P | |
30820 | 226 aa hypothetical protein | |||
32870 | ATP-dependent Clp protease adaptor protein ClpS | |||
32880 | M | M.Pag7811ORF3227P (78% identity) | M.Pag204ORF32880P | |
??? | R | Pte9214ORF4246P (32% identity) | Pag204ORF32880P | |
32890 | C | C.Pte9214ORF4246P (98% identity) | C.Pag204ORF32880P | |
32900 | 611 aa hypothetical protein | |||
33010 | 426 aa hypothetical protein | |||
33020 | M | M.Pag976ORF2046P (100% identity) | M.Pag204ORF33020P | |
33030 | R | Pag976ORF2046P (100% identity) | Pag204ORF33020P | |
33040 | 169 aa hypothetical protein | |||
33850 | 223 aa hypothetical protein | |||
33860 | RM | Pag1268ORF2347P (98% identity) | Pag204ORF33860P | |
33870 | 139 aa hypothetical protein | |||
36520 | 72 aa hypothetical protein | |||
36530 | M | M.Pru82ORF142P (100% identity) | M.Pag204ORF36530P | |
36540 | adenosylhomocysteinase | |||
36570 | sugar fermentation stimulation protein | |||
36580 | M | M.PagC7805ORF3198P (100% identity) | M.Pag204ORF36580P | |
36590 | 238 aa hypothetical protein | |||
36640 | sodium/hydrogen exchanger | |||
36650 | RM | Pag7811ORF3607P (100% identity) | Pag204ORF36650P | |
36660 | 154 aa hypothetical protein | |||
37640 | two-component response regulator | |||
37650 | M | M.Pag976ORF2506P (99% identity) | M.Pag204ORF37650P | |
37660 | 30S ribosomal protein S15 | |||
39920 | HNH endonuclease family protein | |||
39930 | M | M.Pag7811DndCP (100% identity) | M.Pag204DndCP | |
39940 | 661 aa hypothetical protein | |||
39930 | 525 aa hypothetical protein | |||
39940 | M | M.Pag7811DndDP (100% identity) | M.Pag204DndDP | |
39950 | 133 aa hypothetical protein | |||
39940 | 661 aa hypothetical protein | |||
39950 | M | M.PagC7805DndEP (100% identity) | M.Pag204DndEP | |
39960 | 175 aa hypothetical protein | |||
42900 | photosystem I reaction center subunit Ib | |||
42910 | R | Pag7811ORF4197P (100% identity) | Pag204ORF42920P | |
42920 | M | M.Pag7811ORF4197P (100% identity) | M.Pag204ORF42920P | |
42930 | two-component sensor histidine kinase | |||
plasmid plasmid1 | ||||
43950 | 940 aa hypothetical protein | |||
43960 | RM | Pag2AORF4330P (75% identity) | Pag204ORF43960P | |
43970 | 253 aa hypothetical protein | |||
plasmid plasmid2 | ||||
44450 | 181 aa hypothetical protein | |||
44460 | M | M1.BsrBI (60% identity) | M1.Pag204ORF44460P | |
44470 | M | M2.BsrBI (53% identity) | M2.Pag204ORF44460P | |
44480 | R | 410 aa hypothetical protein | Pag204ORF44460P | |
44490 | C | C.Rsi800ORF2469P (56% identity) | C.Pag204ORF44460P | |
44500 | 337 aa hypothetical protein | |||
44550 | 206 aa hypothetical protein | |||
44560 | M | M.Pag758ORF3338BP (52% identity) | M.Pag204ORF44560P | |
44570 | PilT protein domain protein | |||
44890 | 957 aa hypothetical protein | |||
44900 | M | M.Pag1268ORF4508P (89% identity) | M.Pag204ORF44900P | |
44910 | 101 aa hypothetical protein | |||
plasmid plasmid3 | ||||
45010 | 96 aa hypothetical protein | |||
45020 | RM | Pag66ORF4345P (90% identity) | Pag204ORF45020P | |
45030 | 119 aa hypothetical protein | |||
plasmid plasmid4 | ||||
45610 | 147 aa hypothetical protein | |||
45620 | RM | Pag365ORF4368P (72% identity) | Pag204ORF45620P | |
45630 | 169 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18980 | 201 aa hypothetical protein | |||
18990 | M | M.Pag2AORF2064P (100% identity) | M.Pag204ORF18990P | |
19010 | 121 aa hypothetical protein | |||
34310 | 109 aa hypothetical protein | |||
34320 | M | M.PagC7805ORF2983P (100% identity) | M.Pag204ORF34320P | |
34330 | 109 aa hypothetical protein | |||
plasmid plasmid3 | ||||
45070 | phage integrase family protein | |||
45080 | R | Osp6506ORF3410005P (87% identity) | Pag204ORF45110P | |
45090 | 232 aa hypothetical protein | |||
45100 | 451 aa hypothetical protein | |||
45110 | M | M.EsaRM26ORFAP (64% identity) | M.Pag204ORF45110P | |
45120 | MerR family transcriptional regulator | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
22720 | 213 aa hypothetical protein | |||
22730 | R | Pag7811McrBP (83% identity) | Pag204McrBP | |
22740 | R | Pag1268McrCP (96% identity) | Pag204McrCP | |
22750 | 62 aa hypothetical protein |