Escherichia coli 165 |
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Putative Escherichia coli 165 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26343
| Sequence length: | GenBank #: | |
| Chromosome: | 5,087,166 bp | CP020509 |
| plasmid unnamed1: | 118,182 bp | CP020510 |
| plasmid unnamed2: | 85,008 bp | CP020511 |
REBASE acronym: Eco165M
Org_num: 28452
All begin AWB10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3685 | ABC transporter | |||
| 3690 | R | EcoPSJ14ORF27630P (100% identity) | GAANNNNNNNNTTTA | Eco165MORF3700P |
| 3695 | S | S.Eco779ORF15440P (100% identity) | GAANNNNNNNNTTTA | S.Eco165MORF3700P |
| 3700 | M | M.Eco779ORF15440P (100% identity) | GAANNNNNNNNTTTA | M.Eco165MORF3700P |
| 3705 | 50S ribosome-binding GTPase | |||
| 22535 | 322 aa hypothetical protein | |||
| 22540 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco165MORF22545P |
| 22545 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco165MORF22545P |
| 22550 | S | S1.EcoC711ORF19825P (100% identity) | CCANNNNNNNNNTTGG | S.Eco165MORF22545P |
| 22560 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1925 | cell division protein DamX | |||
| 1930 | M | DNA adenine methylase | GATC | M.Eco165MDamP |
| 1935 | ribulose-phosphate 3-epimerase | |||
| 2485 | transporter | |||
| 2490 | M | M.EcoTH9F11ORF2180P (100% identity) | ATGCAT | M.Eco165MORF2490P |
| 2495 | Fis family transcriptional regulator | |||
| 10600 | phosphohydrolase | |||
| 10605 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco165MDcmP |
| 10610 | V | V.EcoTH9F11DcmP (100% identity) | V.Eco165MDcmP | |
| 10615 | drug/metabolite exporter YedA | |||
| 16110 | NinE family protein | |||
| 16115 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco165MORF16110P |
| 16120 | recombination protein NinB | |||
| 22230 | phage holin, lambda family | |||
| 22235 | M | M.SflFF34ORF18205P (100% identity) | M.Eco165MORF22235P | |
| 22240 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 26880 | 101 aa hypothetical protein | |||
| 26885 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco165MORF26885P |
| 26890 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27805 | 73 aa hypothetical protein | |||
| 27810 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco165MORF27810P | |
| 27815 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22560 | endoribonuclease SymE | |||
| ??? | R | EcoW122GmrDP (100% identity) | Eco165MGmrDP | |
| 22575 | IS1 family transposase | |||
| 23000 | HNH endonuclease | |||
| 23005 | R | SflN101McrBP (100% identity) | Eco165MMcrBP | |
| 23010 | R | SflN101McrCP (100% identity) | Eco165MMcrCP | |
| 23015 | 128 aa hypothetical protein | |||