Enterobacter cloacae 109 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Enterobacter cloacae 109 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26343
| Sequence length: | GenBank #: | |
| Chromosome: | 5,140,725 bp | CP020525 |
| plasmid unnamed1: | 106,694 bp | CP020526 |
| plasmid unnamed2: | 70,906 bp | CP020527 |
REBASE acronym: Ecl109
Org_num: 28428
All begin AO413_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2670 | IS1 family transposase | |||
| 2675 | R | KpnB54111IIIP (100% identity) | TTCANNNNNNTCG | Ecl109ORF2685P |
| 2680 | S | S.KpnB54111III (100% identity) | TTCANNNNNNTCG | S.Ecl109ORF2685P |
| 2685 | M | M.KpnB54111III (100% identity) | TTCANNNNNNTCG | M.Ecl109ORF2685P |
| 2690 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10935 | 137 aa hypothetical protein | |||
| 10940 | R | EhoEH1ORF11755P (100% identity) | GCCGGC | Ecl109ORF10945P |
| 10945 | M | M.EspDR25ORFDP (100% identity) | GCCGGC | M.Ecl109ORF10945P |
| 10950 | integrase | |||
| 13480 | drug/metabolite exporter YedA | |||
| 13485 | V | V.EspDR25DcmP (75% identity) | V.Ecl109DcmP | |
| 13490 | M | M.EspDR25DcmP (100% identity) | CCWGG | M.Ecl109DcmP |
| 13495 | phosphohydrolase | |||
| 14705 | holin | |||
| 14710 | M | M.EhoEH1ORF15455P (100% identity) | M.Ecl109ORF14710P | |
| 14715 | TrmB family transcriptional regulator | |||
| 14735 | RusA family crossover junction | |||
| 14740 | M | M.EhoEH1ORF15485P (100% identity) | M.Ecl109ORF14740P | |
| 14745 | phage N-6-adenine-methyltransferase | |||
| 14740 | DNA cytosine methyltransferase | |||
| 14745 | M | M.EhoEH1ORF15490P (100% identity) | M.Ecl109ORF14745P | |
| 14750 | GntR family transcriptional regulator | |||
| 15610 | 75 aa hypothetical protein | |||
| 15615 | M | M.EhoNO69ORF29590P (100% identity) | M.Ecl109ORF15615P | |
| 15620 | 164 aa hypothetical protein | |||
| 16855 | regulator | |||
| 16860 | M | M.EspDR25ORFLP (100% identity) | M.Ecl109ORF16860P | |
| 16865 | Fis family transcriptional regulator | |||
| 21280 | ribulose-phosphate 3-epimerase | |||
| 21285 | M | M.EspDR25ORFIP (100% identity) | GATC | M.Ecl109DamP |
| 21290 | cell division protein DamX | |||
| 22290 | DNA-binding protein | |||
| 22295 | M | M1.PspNIH2ORF20995P (100% identity) | M.Ecl109ORF22295P | |
| 22300 | 273 aa hypothetical protein | |||
| 23295 | 203 aa hypothetical protein | |||
| 23300 | M | M.SenZC055ORF24890P (100% identity) | M.Ecl109ORF23300P | |
| 23305 | 102 aa hypothetical protein | |||
| 23930 | nuclease | |||
| 23935 | M | M.SenZC055ORF26240P (100% identity) | M.Ecl109ORF23935P | |
| 23940 | 56 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 25805 | 73 aa hypothetical protein | |||
| 25810 | M | M.YreW13ORF24350P (100% identity) | M.Ecl109ORF25810P | |
| 25815 | DNA methylase N-4/N-6 domain-containing protein | |||
| plasmid unnamed2 | ||||
| 25995 | resolvase | |||
| 26000 | R | YpsR1ORFAP (99% identity) | CCWGG | Ecl109ORF26005P |
| 26005 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl109ORF26005P |
| 26010 | IS1 family transposase | |||