Ref: Zeng,Q. et al. Mol. Plant Microbe Interact. 30 (10), 813-828 (2017)

REBASE ref # 26303

Complete sequence: 5,593,946 bp

GenBank #: CP028295

REBASE acronym: AavMD5

Org_num: 28337

 

All begin C8246_

Type I
ORF Gene Most similar Specificity Name
 
15890 LysR family transcriptional regulator
15895 M M.Aav19860ORF4671P (97% identity) M.AavMD5ORF15895P
15900 571 aa hypothetical protein
15905 R AavAA811ORF6650P (96% identity) AavMD5ORF15895P
15910 single-stranded DNA-binding protein
Type II
ORF Gene Most similar Specificity Name
 
5945 89 aa hypothetical protein
??? M M.AciSC074ORF11820P (87% identity) M.AavMD5ORF5955P
5960 96 aa hypothetical protein
 
7045 202 aa hypothetical protein
7050 R RthC33ORFFP (86% identity) AavMD5ORF7055P
7055 M M.RthC33ORFFP (85% identity) M.AavMD5ORF7055P
7060 V V.Bch19884ORFAP (53% identity) V.AavMD5ORF7055P
7065 IS5/IS1182 family transposase
 
12175 AbrB/MazE/SpoVT family DNA-binding
12180 RM AciSC074ORF17875P (99% identity) AavMD5ORF12180P
12185 405 aa hypothetical protein
 
12275 DUF3158 domain-containing protein
12280 M M.Aci18784ORF18270P (96% identity) M.AavMD5ORF12280P
12285 single-stranded DNA-binding protein
 
12285 single-stranded DNA-binding protein
??? M M.XsoPPL1ORF14120P (60% identity) M.AavMD5ORF12295P
12300 109 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
1045 lactoylglutathione lyase
1050 M M.Sma92II (72% identity) M.AavMD5ORF1050P
1055 789 aa hypothetical protein
 
18710 IS630 family transposase
18715 R AavSH7ORF18330P (100% identity) AavMD5ORF18730P
18720 216 aa hypothetical protein
18725 375 aa hypothetical protein
18730 M M.AavSH7ORF18330P (100% identity) M.AavMD5ORF18730P
18735 ATP-dependent helicase
 
21375 AAA family ATPase
21380 R AavSH7ORF16280P (100% identity) AavMD5ORF21385P
??? M M.AavSH7ORF16280P (100% identity) M.AavMD5ORF21385P
21400 octaprenyl diphosphate synthase
Type IV
ORF Gene Most similar Specificity Name
 
21365 type IV-A pilus assembly ATPase PilB
21370 R AavSH7McrCP (100% identity) AavMD5McrCP
21375 R AavSH7McrBP (100% identity) AavMD5McrBP
21380 DEAD/DEAH box helicase
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