Acidovorax avenae subsp. avenae INDB2 |
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Putative Acidovorax avenae subsp. avenae INDB2 RM systems
Ref: Zeng,Q. et al. Mol. Plant Microbe Interact. 30 (10), 813-828 (2017)
REBASE ref # 26303
Complete sequence: 5,619,676 bp
GenBank #: CP028292
REBASE acronym: AavINDB2
Org_num: 28334
All begin C8237_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 45 | chromosome segregation protein SMC | |||
| 50 | S | S1.AavSF12ORF60P (100% identity) | S1.AavINDB2ORF60P | |
| 55 | S | S2.AavSF12ORF60P (100% identity) | S2.AavINDB2ORF60P | |
| 60 | M | M.AavSF12ORF60P (100% identity) | M.AavINDB2ORF60P | |
| 65 | R | AavSF12ORF60P (100% identity) | AavINDB2ORF60P | |
| 70 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3940 | twin-arginine translocase subunit TatC | |||
| 3945 | M | M.AavSF12ORF4505P (100% identity) | M.AavINDB2ORF3945P | |
| 3950 | R | AavSF12ORF4505P (100% identity) | AavINDB2ORF3945P | |
| 3955 | XRE family transcriptional regulator | |||
| 17720 | 83 aa hypothetical protein | |||
| 17725 | V | V.AavSF12ORF18565P (100% identity) | V.AavINDB2ORF17730P | |
| 17730 | M | M.AavSF12ORF18565P (100% identity) | M.AavINDB2ORF17730P | |
| 17735 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14850 | octaprenyl diphosphate synthase | |||
| ??? | M | M.AavSH7ORF16280P (100% identity) | M.AavINDB2ORF14865P | |
| 14870 | R | AavSH7ORF16280P (100% identity) | AavINDB2ORF14865P | |
| 14875 | AAA family ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14870 | DEAD/DEAH box helicase | |||
| 14875 | R | AavSH7McrBP (100% identity) | AavINDB2McrBP | |
| 14880 | R | AavSH7McrCP (100% identity) | AavINDB2McrCP | |
| 14885 | type IV-A pilus assembly ATPase PilB | |||