Salmonella enterica subsp. enterica serovar Concord CFSAN018747 |
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Putative Salmonella enterica subsp. enterica serovar Concord CFSAN018747 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26326
| Sequence length: | GenBank #: | |
| Chromosome: | 4,740,838 bp | CP028196 |
| plasmid pGMI14-002_1: | 444,417 bp | CP028197 |
| plasmid pGMI14-002_2: | 92,366 bp | CP028198 |
REBASE acronym: Sen18747
Org_num: 28797
All begin C6651_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18855 | 322 aa hypothetical protein | |||
| 18860 | R | Spy5740IP (100% identity) | TACNNNNNNNGTTC | Sen18747IIIP |
| 18865 | M | M.SenLiv11ORFCP (100% identity) | TACNNNNNNNGTTC | M.Sen18747III |
| 18870 | S | S.Sen94620ORF21415P (100% identity) | TACNNNNNNNGTTC | S.Sen18747III |
| 18875 | endoribonuclease SymE | |||
| 19240 | 72 aa hypothetical protein | |||
| 19245 | R | Sen94620ORF21800P (100% identity) | GACNNNNNNTGCG | Sen18747IIP |
| 19250 | M | M.Sen94620ORF21800P (100% identity) | GACNNNNNNTGCG | M.Sen18747II |
| 19255 | S | S.Sen94620ORF21800P (100% identity) | GACNNNNNNTGCG | S.Sen18747II |
| 19260 | 529 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 225 | cell division protein DamX | |||
| 230 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen18747DamP |
| 235 | ribulose-phosphate 3-epimerase | |||
| 740 | DUF2556 domain-containing protein | |||
| 745 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen18747IV |
| 750 | Fis family transcriptional regulator | |||
| 7795 | phosphohydrolase | |||
| 7800 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen18747DcmP |
| 7805 | V | V.StyUK1DcmP (100% identity) | V.Sen18747DcmP | |
| 7810 | drug/metabolite exporter YedA | |||
| plasmid pGMI14-002_1 | ||||
| 24915 | 284 aa hypothetical protein | |||
| 24920 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sen18747ORF24920P |
| 24925 | DNA-binding protein | |||
| 25050 | 202 aa hypothetical protein | |||
| 25055 | M | M.Ssp15303ORFDP (100% identity) | M.Sen18747ORF25055P | |
| 25060 | 106 aa hypothetical protein | |||
| 25665 | nuclease | |||
| 25670 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Sen18747Dcm2P |
| 25675 | DUF1173 domain-containing protein | |||
| 26315 | 100 aa hypothetical protein | |||
| 26320 | M | M.YrupYR1ORFCP (100% identity) | M.Sen18747ORF26320P | |
| 26325 | 158 aa hypothetical protein | |||
| plasmid pGMI14-002_2 | ||||
| 27165 | 216 aa hypothetical protein | |||
| 27170 | M | M.Sen4474ORF24135P (99% identity) | M.Sen18747ORF27170P | |
| 27175 | glutamine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16590 | 33 aa hypothetical protein | |||
| 16595 | R | Sen94620ORF19140P (100% identity) | CAGAG | Sen18747IP |
| 16600 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen18747I |
| 16605 | MFS transporter | |||