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Putative Campylobacter coli CFSAN054106 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26326
Complete sequence: 1,894,971 bp
GenBank #: CP028187
REBASE acronym: Cco54106
Org_num: 28387
All begin C9J81_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4795 | serine hydrolase family protein | |||
4800 | M | M.Ccos1875ORFAP (100% identity) | CRAANNNNNNNRTAG | M.Cco54106I |
4805 | Fic family protein | |||
4810 | S | S.Cco1157ORF8430P (99% identity) | CRAANNNNNNNRTAG | S.Cco54106I |
4815 | 254 aa hypothetical protein | |||
4820 | 199 aa hypothetical protein | |||
4825 | 0 aa hypothetical protein | |||
4830 | R | Cco12571IVP (99% identity) | CRAANNNNNNNRTAG | Cco54106IP |
4835 | NAD(P)-dependent alcohol dehydrogenase | |||
7665 | succinyl-diaminopimelate desuccinylase | |||
7670 | M | M.CcopORFBP (100% identity) | GAAGNNNNNTG | M.Cco54106IV |
7675 | DUF3800 domain-containing protein | |||
7680 | 167 aa hypothetical protein | |||
7685 | S | S.Cco7435ORF3895P (98% identity) | GAAGNNNNNTG | S.Cco54106IV |
7690 | thiamine biosynthesis protein ThiS | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
705 | 158 aa hypothetical protein | |||
710 | C | C.Cla16712ORF409P (100% identity) | C.Cco54106ORF720P | |
715 | R | CjeJ048ORF3210P (100% identity) | Cco54106ORF720P | |
??? | M | M.Cla16712ORF409P (100% identity) | M.Cco54106ORF720P | |
725 | IS1595-like element ISCaje5 family transposase | |||
2400 | 173 aa hypothetical protein | |||
2405 | M | M.Ccos32805ORF3875P (100% identity) | GATC | M.Cco54106ORF2405P |
2410 | carbamoyl phosphate synthase large subunit | |||
2700 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
2705 | M | M.CcoSH89ORF1180P (100% identity) | RAATTY | M.Cco54106II |
2710 | translation initiation factor IF-3 | |||
3685 | DUF2813 domain-containing protein | |||
3690 | RM | Cco5137ORF1485P (98% identity) | Cco54106ORF3690P | |
3695 | DUF262 domain-containing protein | |||
5285 | virion morphogenesis protein | |||
5290 | M | M.Cco54106ORF10010P (99% identity) | M.Cco54106ORF5290P | |
5295 | 95 aa hypothetical protein | |||
7645 | endonuclease MutS2 | |||
7650 | RM | Ccos1875ORFCP (99% identity) | GAGNNNNNRTG | Cco54106III |
7655 | NAD-dependent deacetylase | |||
7700 | thiazole synthase | |||
7705 | M | M.CjeJ026ORF12910P (100% identity) | GCGC | M.Cco54106ORF7705P |
7710 | R | CjeJ026ORF12910P (100% identity) | Cco54106ORF7705P | |
7715 | 2-iminoacetate synthase ThiH | |||
8300 | 92 aa hypothetical protein | |||
8305 | M | M.Cco0223ORF4200P (98% identity) | M.Cco54106ORF8305P | |
8310 | 147 aa hypothetical protein | |||
10005 | 95 aa hypothetical protein | |||
10010 | M | M.Cco54106ORF5290P (99% identity) | M.Cco54106ORF10010P | |
10015 | virion morphogenesis protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
135 | 171 aa hypothetical protein | |||
140 | R | Cco1466ORF7255P (90% identity) | Cco54106ORF145P | |
145 | M | M.CjeS36ORF3360P (98% identity) | M.Cco54106ORF145P | |
150 | hydrogenase maturation nickel metallochaperone |