Escherichia coli CFSAN064036 |
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Putative Escherichia coli CFSAN064036 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 26326
| Sequence length: | GenBank #: | |
| Chromosome: | 4,815,114 bp | CP028166 |
| plasmid pGMI17-004_1: | 119,076 bp | CP028168 |
REBASE acronym: Eco64036
Org_num: 28582
All begin C6668_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10305 | ABC transporter | |||
| 10310 | S | S.EcoDEC8DORF4208P (100% identity) | S.Eco64036ORF10315P | |
| 10315 | M | M.Ecos671ORFGP (99% identity) | M.Eco64036ORF10315P | |
| 10320 | R | Ecos671ORFGP (96% identity) | Eco64036ORF10315P | |
| 10325 | TIGR03761 family integrating conjugative element | |||
| 19370 | 185 aa hypothetical protein | |||
| 19375 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | Eco64036IP |
| 19380 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.Eco64036I |
| 19385 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.Eco64036I |
| 19390 | addiction module antitoxin | |||
| 20115 | alcohol dehydrogenase | |||
| 20125 | R | EcoM9868ORF38820P (100% identity) | Eco64036ORF20160P | |
| ??? | S | S.EcoH66ORFHP (99% identity) | S1.Eco64036ORF20160P | |
| 20135 | IS3-like element IS3 family transposase | |||
| 20140 | IS3 family transposase | |||
| 20145 | 48 aa hypothetical protein | |||
| 20150 | IS3 family transposase | |||
| 20155 | S | S.EcoYPE3ORF20380P (15% identity) | S2.Eco64036ORF20160P | |
| 20160 | M | M.EcoMB20ORF19675P (100% identity) | M.Eco64036ORF20160P | |
| 20165 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45 | 75 aa hypothetical protein | |||
| 50 | M | M.EcoS081ORF28560P (100% identity) | GATC | M.Eco64036ORF50P |
| 55 | replication endonuclease | |||
| 1880 | TrmB family transcriptional regulator | |||
| 1885 | M | M.Eco47C06ORF13730P (100% identity) | M.Eco64036ORF1885P | |
| 1890 | phage holin, lambda family | |||
| 6690 | drug/metabolite exporter YedA | |||
| 6695 | V | V.SsoSE61DcmP (100% identity) | V.Eco64036DcmP | |
| 6700 | M | M.EcoM9868DcmP (99% identity) | CCWGG | M.Eco64036DcmP |
| 6705 | phosphohydrolase | |||
| 14015 | Fis family transcriptional regulator | |||
| 14020 | M | M.EcoM9868ORF4450P (99% identity) | ATGCAT | M.Eco64036ORF14020P |
| 14025 | DUF2556 domain-containing protein | |||
| 14675 | ribulose-phosphate 3-epimerase | |||
| 14680 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco64036DamP |
| 14685 | protein DamX | |||
| 17705 | replication endonuclease | |||
| 17710 | M | M.SspS13ORF1655P (100% identity) | M.Eco64036ORF17710P | |
| 17715 | R | SspS13ORF1655P (100% identity) | Eco64036ORF17710P | |
| 17720 | DUF262 domain-containing protein | |||
| plasmid pGMI17-004_1 | ||||
| 25645 | 73 aa hypothetical protein | |||
| 25650 | M | M.SspPIBORF23080P (100% identity) | M.Eco64036ORF25650P | |
| 25655 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16175 | 76 aa hypothetical protein | |||
| 16180 | R | SenSP5ORF35P (99% identity) | Eco64036ORF16185P | |
| 16185 | M | M.SenSP5ORF35P (99% identity) | M.Eco64036ORF16185P | |
| 16190 | DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20165 | DUF4942 domain-containing protein | |||
| 20170 | R | EcoYPE3McrBP (100% identity) | Eco64036McrBP | |
| 20175 | R | EcoYPE3McrCP (100% identity) | Eco64036McrCP | |
| 20180 | HNH endonuclease | |||