Escherichia coli 2013C-4404 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 2013C-4404 RM systems
Ref: Patel,P. et al. unpublished
REBASE ref # 27075
| Sequence length: | GenBank #: | |
| Chromosome: | 5,009,822 bp | CP027376 |
| plasmid unnamed1: | 70,152 bp | CP027377 |
| plasmid unnamed3: | 104,889 bp | CP027379 |
REBASE acronym: Eco4404
Org_num: 28481
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | 447 aa hypothetical protein CR517_25310 | |||
| ??? | M | M.EcohubtORF19935P (100% identity) | M.Eco4404ORFFP | |
| ??? | S | S.SflN101ORF11895P (100% identity) | S.Eco4404ORFFP | |
| ??? | M | M.EcoS19651ORF13565P (100% identity) | M.Eco4404ORFDP | |
| ??? | S | S.EcoS19651ORF13565P (87% identity) | S.Eco4404ORFDP | |
| ??? | R | EcoS19651ORF13565P (99% identity) | Eco4404ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.EcoTob1ORF18280P (100% identity) | M.Eco4404ORFAP | |
| ??? | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco4404ORFKP |
| ??? | M | M.Eco17183ORF4990P (100% identity) | GATC | M.Eco4404ORFBP |
| ??? | M | M.Sbo812ORFAP (100% identity) | M.Eco4404ORFCP | |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4404DamP |
| ??? | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4404ORFEP |
| ??? | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco4404Dcm2P |
| ??? | V | V.EcoSC3DcmP (99% identity) | V.Eco4404Dcm2P | |
| plasmid unnamed1 | ||||
| ??? | M | M.Sfl7ORF23565P (99% identity) | M.Eco4404ORFHP | |
| plasmid unnamed3 | ||||
| ??? | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.Eco4404ORFJP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed3 | ||||
| ??? | R | Eco3665ORFGP (99% identity) | Eco4404ORFIP | |
| ??? | M | M.EcoSTEC1080ORF26050P (99% identity) | M.Eco4404ORFIP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | SflN101McrBP (100% identity) | Eco4404McrBP | |
| ??? | R | EcohubtMcrCP (100% identity) | Eco4404McrCP | |
| ??? | SAM-dependent methyltransferase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.EcoR43ORF12390P (100% identity) | M.Eco4404ORFGP | |