Megasphaera elsdenii DSM 20460 |
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Putative Megasphaera elsdenii DSM 20460 RM systems
Ref: Hatmaker,E.A. et al. Genome Announc (2018) In press
REBASE ref # 26394
Complete sequence: 2,478,942 bp
GenBank #: CP027570
REBASE acronym: Mel20460
Org_num: 28725
All begin C6362_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1575 | IS3 family transposase | |||
| 1580 | S | S.MelORF51P (100% identity) | S.Mel20460ORF1585P | |
| 1585 | M | M.MelORF51P (100% identity) | M.Mel20460ORF1585P | |
| 1590 | R | MelORF51P (97% identity) | Mel20460ORF1585P | |
| 1595 | 177 aa hypothetical protein | |||
| 11160 | 94 aa hypothetical protein | |||
| 11165 | R | MelORF1615P (100% identity) | Mel20460ORF11175P | |
| 11170 | S | S.MelORF1615P (100% identity) | S.Mel20460ORF11175P | |
| 11175 | M | M.MelORF1615P (100% identity) | M.Mel20460ORF11175P | |
| 11180 | sigma-70 family RNA polymerase sigma factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6515 | 183 aa hypothetical protein | |||
| 6520 | M | M1.Mel14ORF5420P (91% identity) | M1.Mel20460ORF6520P | |
| 6525 | M | M1.MelORF973P (100% identity) | M2.Mel20460ORF6520P | |
| 6530 | M | M2.MelORF973P (100% identity) | M3.Mel20460ORF6520P | |
| 6535 | R | MelORF973P (100% identity) | Mel20460ORF6520P | |
| 6540 | DNA polymerase III subunit alpha | |||
| 9465 | deoxyuridine 5-triphosphate | |||
| 9470 | M | M.MelORF1947P (100% identity) | M.Mel20460ORF9470P | |
| 9475 | 72 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 710 | PIN/TRAM domain-containing protein | |||
| 715 | R | MelORF1373P (100% identity) | Mel20460ORF715P | |
| 720 | (deoxy)nucleoside triphosphate | |||
| 9175 | transcriptional regulator | |||
| 9180 | R | MelMcrBP (100% identity) | Mel20460McrBP | |
| 9185 | R | MelMcrCP (100% identity) | Mel20460McrCP | |
| 9190 | 61 aa hypothetical protein | |||