Dietzia species oral taxon 368 W5195 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Dietzia species oral taxon 368 W5195 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
| Sequence length: | GenBank #: | |
| Chromosome: | 3,400,009 bp | CP027238 |
| plasmid unnamed1: | 227,619 bp | CP027239 |
REBASE acronym: DspW5195
Org_num: 28425
All begin C3V38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5770 | 707 aa hypothetical protein | |||
| 5775 | R | MliDND4ORF12025P (92% identity) | ACCNNNNNNCGTC | DspW5195IIP |
| 5780 | S | S.BsqMORFFP (53% identity) | ACCNNNNNNCGTC | S.DspW5195II |
| 5785 | M | M.GspHY186ORFAP (94% identity) | ACCNNNNNNCGTC | M.DspW5195II |
| 5790 | XRE family transcriptional regulator | |||
| 6465 | 197 aa hypothetical protein | |||
| 6470 | M | M.Dci55ORF45BP (51% identity) | M.DspW5195ORF6470P | |
| 6475 | DNA gyrase subunit A | |||
| 7035 | DNA-binding protein | |||
| 7040 | M | M.Dci55ORF930P (97% identity) | CGAANNNNNTCC | M.DspW5195I |
| 7045 | S | S.Pmi614I (33% identity) | CGAANNNNNTCC | S.DspW5195I |
| 7050 | AAA family ATPase | |||
| 7055 | R | Dci55ORF930P (98% identity) | CGAANNNNNTCC | DspW5195IP |
| 7060 | LLM class flavin-dependent oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8250 | ATP-binding protein | |||
| 8255 | M | M.Dsp184ORFEP (97% identity) | M.DspW5195ORF8255P | |
| 8260 | alpha-1,4 polygalactosaminidase | |||
| 11700 | carboxylesterase/lipase family protein | |||
| 11710 | M | 269 aa hypothetical protein | M.DspW5195ORF11710P | |
| 11715 | ISL3 family transposase | |||
| 13940 | 1365 aa hypothetical protein | |||
| 13945 | RM | Cgl56828ORF12165P (49% identity) | DspW5195ORF13945P | |
| 13950 | phage resistance protein | |||
| plasmid unnamed1 | ||||
| 16420 | 221 aa hypothetical protein | |||
| 16425 | RM | GbrORF4906P (80% identity) | DspW5195ORF16425P | |
| 16430 | 205 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11255 | 230 aa hypothetical protein | |||
| 11260 | M | M.Dma43672ORF12365P (100% identity) | M.DspW5195ORF11260P | |
| 11265 | IS630 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 470 | transcription elongation factor GreA | |||
| 475 | R | Dma43672McrBP (99% identity) | DspW5195McrBP | |
| ??? | R | Dma43672McrCP (65% identity) | DspW5195McrCP | |
| 485 | SGNH/GDSL hydrolase family protein | |||