Vibrio cholerae A1552 |
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Putative Vibrio cholerae A1552 RM systems
Ref: Kemter,F.S. et al. PLoS Genet. 14 (3), e1007251 (2018)
REBASE ref # 26459
| Sequence length: | GenBank #: | |
| chromosome I: | 3,015,093 bp | CP024867 |
| chromosome II: | 1,070,367 bp | CP024868 |
REBASE acronym: VchA1552
Org_num: 28863
All begin VCA1552_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1545 | 687 aa hypothetical protein | |||
| 1546 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | VchA1552ORF7865P |
| 1547 | 663 aa hypothetical protein | |||
| 1548 | 470 aa hypothetical protein | |||
| 1549 | S | S.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | S.VchA1552ORF7865P |
| 1550 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.VchA1552ORF7865P |
| 1551 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2380 | Ribulose-phosphate 3-epimerase | |||
| 2381 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchA1552DamP |
| 2382 | cell division protein DamX | |||
| chromosome II | ||||
| 2970 | GMP reductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchA1552ORF15135P |
| 2972 | 638 aa hypothetical protein | |||
| 3165 | 63 aa hypothetical protein | |||
| 3166 | M | M.VspNIH41ORF3529P (94% identity) | M.VchA1552ORF3166P | |
| 3167 | 141 aa hypothetical protein | |||