Mycoplasma fermentans JER |
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Putative Mycoplasma fermentans JER RM systems
Ref: Strittmatter,A. et al. unpublished
REBASE ref # 12036
Complete sequence: 977,524 bp
GenBank #: CP001995 (NC_014552)
REBASE acronym: MfeJER
Org_num: 6339
All begin MFE_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2390 | 226 aa hypothetical protein | |||
| 2400 | S | S1.MfeJERORF4610P (50% identity) | S.MfeJERORF2400P | |
| 2410 | 597 aa conserved hypothetical membrane associated | |||
| 4580 | 119 aa hypothetical protein | |||
| 4590 | R | Mcl10199ORF2880P (36% identity) | MfeJERORF4610P | |
| 4600 | S | S.Mfe64ORF291P (68% identity) | S1.MfeJERORF4610P | |
| 4610 | M | M.Mga3700ORF3005P (60% identity) | M.MfeJERORF4610P | |
| 4620 | S | S3.PmeBin465ORFAP (21% identity) | S2.MfeJERORF4610P | |
| 4630 | 313 aa hypothetical membrane spanning protein | |||
| 5820 | amino acid permease | |||
| 5830 | S | S.Mfe18ORF853P (99% identity) | S.MfeJERORF5830P | |
| 5840 | ATP-dependent DNA helicase | |||
| 8320 | transcriptional regulator | |||
| 8330 | R | Mfe18ORF720P (99% identity) | MfeJERORF8340P | |
| 8340 | M | M.Mfe64ORF1024P (100% identity) | M.MfeJERORF8340P | |
| 8350 | S | S3.Mfe18ORF720P (96% identity) | S1.MfeJERORF8340P | |
| 8360 | S | S2.Mfe64ORF1024P (100% identity) | S2.MfeJERORF8340P | |
| 8370 | S | S1.Mfe64ORF1024P (59% identity) | S3.MfeJERORF8340P | |
| 8380 | site-specific recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | xylulose-5-phosphate phosphoketolase | |||
| 180 | M | M.Mfe64ORF19P (99% identity) | CCTTC | M.MfeJERORF180P |
| 210 | 252 aa conserved hypothetical membrane spanning | |||
| 1230 | predicted abortive infection protein AbiGII | |||
| 1240 | R | Mfe64ORF147P (75% identity) | GATC | MfeJERORF1250P |
| 1250 | M | M.Mfe64ORF147P (91% identity) | GATC | M.MfeJERORF1250P |
| 1260 | ATP-dependent DNA helicase | |||
| 2830 | 235 aa hypothetical protein | |||
| 2840 | M | M.MfeJERORF4910P (97% identity) | M.MfeJERORF2840P | |
| 2850 | 166 aa hypothetical protein | |||
| 4907 | 155 aa hypothetical protein | |||
| ??? | M | M.Mfe64ORF106P (99% identity) | M.MfeJERORF4910P | |
| 4915 | Holliday junction DNA helicase RuvB | |||
| 6820 | 203 aa conserved hypothetical membrane spanning | |||
| 6830 | M | M.Mau15026ORF4460P (51% identity) | CG | M.MfeJERORF6830P |
| 6850 | 423 aa conserved hypothetical membrane spanning | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 290 | 77 aa hypothetical protein | |||
| 300 | R | Mmy2806ORF3290P (30% identity) | MfeJERORF310P | |
| 310 | M | M.MspPen4ORF2555AP (45% identity) | M.MfeJERORF310P | |
| 320 | 122 aa conserved hypothetical protein | |||