Escherichia coli UM146 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli UM146 RM systems
Ref: Krause,D.O. et al. unpublished
REBASE ref # 12324
Complete sequence: 4,993,013 bp
GenBank #: CP002167
REBASE acronym: Eco146
Org_num: 6341
All begin UM146_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22470 | endoribonuclease SymE | |||
| 22475 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco146ORF22480P |
| 22480 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco146ORF22480P |
| 22485 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco146ORF22480P |
| 22490 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | 59 aa hypothetical protein | |||
| 55 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco146ORF55P |
| 60 | DNA-binding protein Fis | |||
| 7380 | 231 aa hypothetical protein | |||
| 7385 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco146DcmP |
| 7390 | very short patch repair protein | |||
| 7385 | DNA cytosine methylase | |||
| 7390 | V | V.SflC32DcmP (74% identity) | V.Eco146ORF7390P | |
| 7395 | 306 aa hypothetical protein | |||
| 10670 | 75 aa hypothetical protein | |||
| 10675 | M | M.SboBSORF1444P (100% identity) | M.Eco146ORF10675P | |
| 10680 | 65 aa hypothetical protein | |||
| 11500 | NinE | |||
| 11505 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco146ORF11505P |
| 11510 | recombination protein ninB from phage origin | |||
| 16985 | ribulose-phosphate 3-epimerase | |||
| 16990 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco146DamP |
| 16995 | 428 aa hypothetical protein | |||
| 21905 | 340 aa hypothetical protein | |||
| ??? | R | Eco4518ORF18100P (100% identity) | Eco146ORF21920P | |
| 21920 | M | M.EcosS3ORF15775P (100% identity) | M.Eco146ORF21920P | |
| 21935 | 93 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3580 | DNA invertase | |||
| 3585 | R | EspFAAGmrSDP (98% identity) | Eco146GmrSDP | |
| 3590 | protein from DinI-like family | |||
| 22485 | type I restriction enzyme EcoKI subunit R | |||
| 22490 | R | EcosS1MrrP (100% identity) | Eco146MrrP | |
| 22495 | GTP-binding protein YjiA | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3375 | 164 aa hypothetical protein | |||
| 3380 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco146ORF3380P |
| 3385 | regulatory protein | |||