Escherichia coli 38.ii.h |
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Putative Escherichia coli 38.ii.h RM systems
Ref: Sharma,P. et al. unpublished
REBASE ref # 25720
Contig set: 5,300,508 bp
GenBank #: NJAF00000000 (NZ_NJAF00000000)
REBASE acronym: Eco38iih
Org_num: 27726
All begin CDN87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26390 | 112 aa hypothetical protein | |||
| 26395 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco38iihORF26405P |
| 26400 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco38iihORF26405P |
| 26405 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco38iihORF26405P |
| 26410 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8905 | 108 aa hypothetical protein | |||
| 8920 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco38iihORF8920P |
| 8925 | TrmB family transcriptional regulator | |||
| 25995 | 83 aa hypothetical protein | |||
| 26000 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco38iihORF26000P |
| 26005 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco38iihORF26000P |
| 26010 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco38iihORF26000P |
| 26015 | restriction endonuclease | |||
| 27385 | 0 aa hypothetical protein | |||
| 27390 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco38iihORF27390P |
| 27395 | 73 aa hypothetical protein | |||
| 1615 | TIGR02687 family protein | |||
| 1620 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco38iihORF1620P |
| 1625 | DNA repair protein | |||
| 20150 | ribulose-phosphate 3-epimerase | |||
| 20155 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco38iihDamP |
| 20160 | cell division protein DamX | |||
| 6045 | 71 aa hypothetical protein | |||
| 6050 | M | M.KpnYN1ORFGP (89% identity) | M.Eco38iihORF6050P | |
| 6055 | transcriptional regulator | |||
| 965 | integrase | |||
| 970 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco38iihORF970P |
| 975 | 568 aa hypothetical protein | |||
| 11670 | drug/metabolite exporter YedA | |||
| 11675 | V | V.SflC32DcmP (74% identity) | V.Eco38iihDcmP | |
| 11680 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco38iihDcmP |
| 11685 | phosphohydrolase | |||
| 19500 | Fis family transcriptional regulator | |||
| 19505 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco38iihORF19505P |
| 19510 | transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26010 | restriction endonuclease | |||
| 26015 | R | EcosS9McrCP (100% identity) | Eco38iihMcrCP | |
| 26020 | R | EcosS3McrBP (100% identity) | Eco38iihMcrBP | |
| 26025 | 60 aa hypothetical protein | |||