Ref: Benahmed,F.H. et al. unpublished

REBASE ref # 26211

Sequence length:GenBank #:
Chromosome: 4,078,507 bp CP027183
plasmid unnamed1: 105,128 bp CP027185
plasmid unnamed2: 60,699 bp CP027184

REBASE acronym: Aba52

Org_num: 27795

 

All begin CSB68_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2597 511 aa hypothetical protein
2598 S S.Aba70ORF629P (1% identity) S.Aba52ORF2599P
2599 M M.Aba70ORF629P (1% identity) M.Aba52ORF2599P
2600 304 aa hypothetical protein
 
2645 transposase C of IS166 homeodomain protein
2646 R Aba70ORF580P (1% identity) Aba52ORF2648P
2647 S S.Aba70ORF580P (1% identity) S.Aba52ORF2648P
2648 M M.Aba70ORF580P (0% identity) M.Aba52ORF2648P
2649 51 aa hypothetical protein
 
plasmid unnamed1
 
4038 membrane protein
4039 M M.Aba70ORF4059P (1% identity) M.Aba52ORF4039P
4040 S S1.Aba70ORF4059P (1% identity) S1.Aba52ORF4039P
4041 HTH-like domain protein
4042 transposase family protein
4043 S S2.Aba70ORF4059P (0% identity) S2.Aba52ORF4039P
4044 abortive infection family protein
4045 R Aba70ORF4059P (1% identity) Aba52ORF4039P
4046 44 aa hypothetical protein
 
plasmid unnamed2
 
4140 retron-type reverse transcriptase domain
4141 M M.AbaA388ORF31P (1% identity) M.Aba52ORF4141P
4142 S S.Aba70ORF4316P (1% identity) S.Aba52ORF4141P
4143 tnpA transposase
 
4173 initiator Replication family protein
4174 R AbaACORF4P (1% identity) Aba52ORF4181P
4175 replicase domain protein
4176 origin of replication binding family protein
4177 toxin YafO, type II toxin-antitoxin system
4178 53 aa hypothetical protein
4179 helix-turn-helix family protein
4180 reverse transcriptase family protein
4181 M M.AbaA388ORF31P (1% identity) M.Aba52ORF4181P
??? S S.Aba70ORF4316P (1% identity) S.Aba52ORF4181P
4183 araC-like ligand binding domain protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
2453 316 aa hypothetical protein
2454 M M.Aba70ORF771P (1% identity) M.Aba52ORF2454P
2455 96 aa hypothetical protein
 
2465 81 aa hypothetical protein
??? M M.Aba70ORF759P (1% identity) M.Aba52ORF2466P
2467 87 aa hypothetical protein
 
3275 riboflavin synthase, alpha subunit
3276 M M.AbaLAC4ORF35560P (1% identity) RAATTY M.Aba52ORF3276P
3277 riboflavin biosynthesis protein RibD
 
3796 general stress protein 14
3797 R AbaSSA6ORF4085P (1% identity) C Aba52ORF3797P
3798 152 aa hypothetical protein