Cyanothece species PCC 7822 |
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Putative Cyanothece species PCC 7822 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12025
| Sequence length: | GenBank #: | |
| Chromosome: | 6,091,620 bp | CP002198 (NC_014501) |
| Chromosome: | 5,725,459 bp | ABVE00000000 (NZ_ABVE00000000) |
| plasmid Cy782202: | 473,846 bp | CP002200 (NC_014534) |
| plasmid Cy782203: | 291,993 bp | CP002201 (NC_014502) |
REBASE acronym: Csp7822
Org_num: 5888
All begin Cyan7822_, Cyan7822DRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 691 | pseudogene | |||
| 692 | M | M.Csp7822ORF2288P (100% identity) | M.Csp7822ORF692P | |
| 693 | S | S.Csp7822ORF2288P (100% identity) | S.Csp7822ORF692P | |
| 694 | 236 aa hypothetical protein | |||
| 695 | R | Csp7822ORF2288P (100% identity) | Csp7822ORF692P | |
| 696 | 4-diphosphocytidyl-2C-methyl-D-erythritol | |||
| 838 | transporter, hydrophobe/amphiphile efflux-1 | |||
| 839 | M | M.Rcu932ORF24810P (15% identity) | M.Csp7822ORF839P | |
| 840 | R | type III restriction protein res subunit | Csp7822ORF839P | |
| 841 | 119 aa hypothetical protein | |||
| 2365 | 238 aa conserved hypothetical protein | |||
| 2367 | M | M.Csp7424ORF4142P (27% identity) | M.Csp7822ORF2367P | |
| 2368 | 199 aa conserved hypothetical protein | |||
| 4048 | addiction module toxin, Txe/YoeB family | |||
| ??? | M | M.Csp7822ORF4712P (100% identity) | M.Csp7822ORF4049P | |
| 4051 | multi-sensor signal transduction histidine | |||
| 5269 | 237 aa hypothetical protein | |||
| 5270 | R | Csp7822ORF3217P (100% identity) | Csp7822ORF5270P | |
| 5271 | protein of unknown function DUF29 | |||
| 5272 | M | M.Csp7822ORF3217P (100% identity) | M.Csp7822ORF5270P | |
| 5273 | S | S.Csp7822ORF3217P (100% identity) | S.Csp7822ORF5270P | |
| 5274 | 167 aa conserved hypothetical protein | |||
| Chromosome | ||||
| 2284 | 4-diphosphocytidyl-2C-methyl-D-erythritol | |||
| 2285 | R | Csp7822ORF692P (100% identity) | Csp7822ORF2288P | |
| 2286 | 236 aa hypothetical protein | |||
| 2287 | S | S.Csp7822ORF692P (100% identity) | S.Csp7822ORF2288P | |
| 2288 | M | M.Csp7822ORF692P (100% identity) | M.Csp7822ORF2288P | |
| 2289 | 35 aa hypothetical protein | |||
| 3215 | 167 aa conserved hypothetical protein | |||
| 3216 | S | S.Csp7822ORF5270P (100% identity) | S.Csp7822ORF3217P | |
| 3217 | M | M.Csp7822ORF5270P (100% identity) | M.Csp7822ORF3217P | |
| 3218 | protein of unknown function DUF29 | |||
| 3219 | R | Csp7822ORF5270P (100% identity) | Csp7822ORF3217P | |
| 3220 | 237 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 110 | RES domain protein | |||
| 111 | M | M.Csp7822ORF2876P (100% identity) | GGCC | M.Csp7822ORF111P |
| 112 | protein of unknown function DUF820 | |||
| 352 | PAS/PAC sensor hybrid histidine kinase | |||
| 353 | M | M.Csp7424ORF4974P (41% identity) | CAGCTG | M.Csp7822ORF353P |
| 354 | lipoprotein signal peptidase | |||
| 1235 | MerR family transcriptional regulator | |||
| 1236 | M | M.Cap1201ORF60P (81% identity) | CAGCTG | M.Csp7822ORF1236P |
| 1237 | protein of unknown function DUF87 | |||
| 1254 | 6-phosphogluconate dehydrogenase NAD-binding | |||
| 1255 | M | M.Msp596ORF2184P (53% identity) | GGYRCC | M.Csp7822ORF1255P |
| 1256 | R | Dma2077ORF67670P (58% identity) | GGYRCC | Csp7822ORF1255P |
| 1257 | photosystem II chlorophyll-binding protein CP47 | |||
| 1615 | 123 aa conserved hypothetical protein | |||
| 1616 | M | M.Csp7822ORF992P (100% identity) | GATC | M.Csp7822ORF1616P |
| 1617 | 3-dehydroquinate synthase | |||
| 1795 | Protein of unknown function DUF2307, | |||
| 1796 | M | M.Csp7822ORF809P (100% identity) | CCGG | M.Csp7822ORF1796P |
| 1797 | undecaprenol kinase | |||
| 1844 | glutamyl-tRNA synthetase | |||
| ??? | M | M.Csp7822ORF757P (80% identity) | CAGCTG | M.Csp7822ORF1845P |
| 1845 | DNA methylase N-4/N-6 domain-containing protein | |||
| 1846 | M | M.Csp7822ORF1845P (80% identity) | CAGCTG | M.Csp7822ORF757P |
| 1877 | Cl- channel voltage-gated family protein | |||
| 1878 | M | M.Csp7822ORF724P (100% identity) | GCTAGC | M.Csp7822ORF1878P |
| 1879 | R | Csp7822ORF724P (100% identity) | GCTAGC | Csp7822ORF1878P |
| 1880 | C | C.Csp7822ORF724P (100% identity) | C.Csp7822ORF1878P | |
| 1881 | 260 aa conserved hypothetical protein | |||
| 2009 | 134 aa conserved hypothetical protein | |||
| 2010 | R | Csp7822ORF584P (100% identity) | GGATCC | Csp7822ORF2010P |
| 2011 | M | M.Csp7822ORF584P (100% identity) | GGATCC | M.Csp7822ORF2010P |
| 2012 | DNA binding domain protein, excisionase family | |||
| 2174 | ABC-1 domain protein | |||
| 2175 | M | M.Csp7822ORF418P (100% identity) | GCSGC | M.Csp7822ORF2175P |
| 2176 | peptidase U61 LD-carboxypeptidase A | |||
| 2343 | agmatinase | |||
| 2344 | M | M.Csp7822ORF247P (100% identity) | RGCGCY | M.Csp7822ORF2344P |
| 2345 | 342 aa conserved hypothetical protein | |||
| 2769 | response regulator receiver modulated serine | |||
| 2770 | M | M.Csp7822ORF1855P (99% identity) | CTGCAG | M.Csp7822ORF2770P |
| 2771 | CheA signal transduction histidine kinase | |||
| 2994 | 68 aa hypothetical protein | |||
| 2995 | RM | Csp7822ORF4308P (83% identity) | Csp7822ORF2995P | |
| 2996 | protein of unknown function DUF29 | |||
| 3971 | exodeoxyribonuclease III | |||
| 3972 | M | M.Csp7822ORF4793P (100% identity) | CGATCG | M.Csp7822ORF3972P |
| 3973 | 164 aa hypothetical protein | |||
| 4274 | 144 aa hypothetical protein | |||
| 4275 | M | M.Csp7822ORF4581P (100% identity) | TTCGAA | M.Csp7822ORF4275P |
| 4276 | para-aminobenzoate synthase component I | |||
| 4341 | Creatininase | |||
| 4342 | M | M.Csp7822ORF4515P (63% identity) | GCSGC | M.Csp7822ORF4342P |
| 4343 | Heavy metal transport/detoxification protein | |||
| 4807 | SAM-dependent methyltransferase | |||
| 4808 | M | M.Csp7822ORF3684P (100% identity) | GTMKAC | M.Csp7822ORF4808P |
| 4809 | glutamyl-tRNA(Gln) amidotransferase, C subunit | |||
| 5082 | protoheme IX farnesyltransferase | |||
| 5083 | R | 62 aa hypothetical protein PCC7424_5155 | CCTNAGG | Csp7822ORF5084P |
| 5084 | M | M.Csp7822ORF3406P (80% identity) | CCTNAGG | M.Csp7822ORF5084P |
| 5085 | Glutathione S-transferase domain protein | |||
| 5185 | serine/threonine protein kinase | |||
| 5186 | M | M.Csp7424ORF1108P (28% identity) | M.Csp7822ORF5186P | |
| 5187 | protein of unknown function DUF1400 | |||
| 5522 | CpcD phycobilisome linker domain protein | |||
| 5523 | C | C.Csp7822ORF2961P (100% identity) | C.Csp7822ORF5525P | |
| 5524 | R | Csp7822ORF2961P (100% identity) | RCATGY | Csp7822ORF5525P |
| 5525 | M | M.Csp7822ORF2961P (100% identity) | RCATGY | M.Csp7822ORF5525P |
| 5526 | 560 aa conserved hypothetical protein | |||
| Chromosome | ||||
| 2960 | 532 aa conserved hypothetical protein | |||
| 2961 | M | M.Csp7822ORF5525P (100% identity) | RCATGY | M.Csp7822ORF2961P |
| 2962 | R | Csp7822ORF5525P (100% identity) | RCATGY | Csp7822ORF2961P |
| 2963 | C | C.Csp7822ORF5525P (100% identity) | C.Csp7822ORF2961P | |
| 2964 | CpcD phycobilisome linker domain protein | |||
| 4792 | 168 aa hypothetical protein | |||
| 4793 | M | M.Csp7822ORF3972P (100% identity) | CGATCG | M.Csp7822ORF4793P |
| 4794 | exodeoxyribonuclease III | |||
| 4514 | heavy metal transport/detoxification protein | |||
| 4515 | M | M.Csp7822ORF4342P (63% identity) | GCSGC | M.Csp7822ORF4515P |
| 4516 | Creatininase | |||
| 4580 | para-aminobenzoate synthase component I | |||
| 4581 | M | M.Csp7822ORF4275P (100% identity) | TTCGAA | M.Csp7822ORF4581P |
| 4582 | 144 aa hypothetical protein | |||
| 246 | 342 aa conserved hypothetical protein | |||
| 247 | M | M.Csp7822ORF2344P (100% identity) | RGCGCY | M.Csp7822ORF247P |
| 248 | agmatinase | |||
| 417 | peptidase U61 LD-carboxypeptidase A | |||
| 418 | M | M.Csp7822ORF2175P (100% identity) | GCSGC | M.Csp7822ORF418P |
| 419 | ABC-1 domain protein | |||
| 3405 | Glutathione S-transferase domain | |||
| 3406 | M | M.Csp7822ORF5084P (80% identity) | CCTNAGG | M.Csp7822ORF3406P |
| 3407 | protoheme IX farnesyltransferase | |||
| 583 | DNA binding domain protein, excisionase family | |||
| 584 | M | M.Csp7822ORF2010P (100% identity) | GGATCC | M.Csp7822ORF584P |
| 585 | R | Csp7822ORF2010P (100% identity) | GGATCC | Csp7822ORF584P |
| 586 | 134 aa conserved hypothetical protein | |||
| 1854 | response regulator receiver modulated serine | |||
| 1855 | M | M.Csp7822ORF2770P (99% identity) | CTGCAG | M.Csp7822ORF1855P |
| 1856 | CheA signal transduction histidine kinase | |||
| 3683 | glutamyl-tRNA(Gln) amidotransferase, C subunit | |||
| 3684 | M | M.Csp7822ORF4808P (100% identity) | GTMKAC | M.Csp7822ORF3684P |
| 3685 | SAM-dependent methyltransferase | |||
| 721 | 260 aa conserved hypothetical protein | |||
| 722 | C | C.Csp7822ORF1878P (100% identity) | C.Csp7822ORF724P | |
| 723 | R | Csp7822ORF1878P (100% identity) | GCTAGC | Csp7822ORF724P |
| 724 | M | M.Csp7822ORF1878P (100% identity) | GCTAGC | M.Csp7822ORF724P |
| 725 | Cl-channel, voltage gated | |||
| 2875 | protein of unknown function DUF820 | |||
| 2876 | M | M.Csp7822ORF111P (100% identity) | GGCC | M.Csp7822ORF2876P |
| 2877 | RES domain protein | |||
| 808 | undecaprenol kinase | |||
| 809 | M | M.Csp7822ORF1796P (100% identity) | CCGG | M.Csp7822ORF809P |
| 810 | 473 aa conserved hypothetical protein | |||
| 991 | 3-dehydroquinate synthase | |||
| 992 | M | M.Csp7822ORF1616P (100% identity) | GATC | M.Csp7822ORF992P |
| 993 | 100 aa conserved hypothetical protein | |||
| plasmid Cy782202 | ||||
| 6355 | pseudogene | |||
| ??? | RM | hypothetical protein | Csp7822ORF6356P | |
| 6357 | 79 aa conserved hypothetical protein | |||
| plasmid Cy782203 | ||||
| 6832 | 74 aa conserved hypothetical protein | |||
| 6833 | M | M.Csp7424ORF5431P (37% identity) | M.Csp7822ORF6833P | |
| 6834 | 58 aa hypothetical protein | |||