Methylophaga nitratireducenticrescens GP59 |
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Putative Methylophaga nitratireducenticrescens GP59 RM systems
Ref: Villemur,R. unpublished
REBASE ref # 26110
| Sequence length: | GenBank #: | |
| Chromosome: | 3,238,484 bp | CP021973 |
| plasmid pGP59-32: | 32,421 bp | CP021975 |
REBASE acronym: MniGP59
Org_num: 27442
All begin CDW43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4000 | 172 aa hypothetical protein | |||
| 4005 | M | M.Msp042ORF3458P (86% identity) | M.MniGP59ORF4005P | |
| 4010 | 83 aa hypothetical protein | |||
| 4015 | IS982 family transposase | |||
| 4020 | S | S.SspW3ORF317P (44% identity) | S.MniGP59ORF4005P | |
| 4025 | R | AspNLF57ORF5710P (70% identity) | MniGP59ORF4005P | |
| 4030 | 238 aa hypothetical protein | |||
| 9575 | 94 aa hypothetical protein | |||
| 9580 | R | MspJAM1ORF1968P (100% identity) | MniGP59ORF9590P | |
| 9585 | S | S.MspJAM1ORF1968P (100% identity) | S.MniGP59ORF9590P | |
| 9590 | M | M.MspJAM1ORF1968P (100% identity) | M.MniGP59ORF9590P | |
| 9595 | molybdopterin oxidoreductase family protein | |||
| 10490 | 105 aa hypothetical protein | |||
| 10495 | R | MspJAM1ORF2154P (99% identity) | MniGP59ORF10510P | |
| 10500 | nucleotidyltransferase | |||
| 10505 | S | S.MspJAM1ORF2154P (96% identity) | S.MniGP59ORF10510P | |
| 10510 | M | M.MspJAM1ORF2154P (98% identity) | M.MniGP59ORF10510P | |
| 10515 | 334 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4070 | 300 aa hypothetical protein | |||
| 4075 | M | M.Spu4MORF3415P (52% identity) | M.MniGP59ORF4075P | |
| 4080 | 84 aa hypothetical protein | |||
| 8880 | transcriptional regulator | |||
| 8885 | M | M.MspJAM1ORF1858P (100% identity) | M.MniGP59ORF8885P | |
| 8890 | 700 aa hypothetical protein | |||
| 10125 | argininosuccinate synthase | |||
| 10130 | M | M.MspJAM1ORF2082P (100% identity) | M.MniGP59ORF10130P | |
| 10135 | dihydrolipoyl dehydrogenase | |||
| 14925 | 72 aa hypothetical protein | |||
| 14930 | M | M.MniGP59ORF15225P (100% identity) | M.MniGP59ORF14930P | |
| 14935 | Com family DNA-binding transcriptional | |||
| 15220 | 72 aa hypothetical protein | |||
| 15225 | M | M.MniGP59ORF14930P (100% identity) | M.MniGP59ORF15225P | |
| 15230 | Com family DNA-binding transcriptional | |||
| plasmid pGP59-32 | ||||
| 16035 | 69 aa hypothetical protein | |||
| 16040 | M | M.PspST2H9ORF23955P (73% identity) | M.MniGP59ORF16040P | |
| 16045 | 75 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3425 | 192 aa hypothetical protein | |||
| 3430 | R | Msp11AORF1681P (88% identity) | MniGP59ORF3435P | |
| 3435 | M | M.MnaD158WORF18960P (64% identity) | M.MniGP59ORF3435P | |
| 3440 | AAA family ATPase | |||
| 12310 | helicase | |||
| 12315 | M | M.MspJAM1ORF2782P (100% identity) | M.MniGP59ORF12315P | |
| 12320 | cell filamentation protein Fic | |||
| 12325 | R | MspJAM1ORF2782P (100% identity) | MniGP59ORF12315P | |
| 12330 | pyridine nucleotide-disulfide oxidoreductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10515 | 334 aa hypothetical protein | |||
| 10520 | R | MspJAM1MrrP (100% identity) | MniGP59MrrP | |
| 10525 | AraC family transcriptional regulator | |||