Ref: Weingarten,R.A. et al. MBio 9 (1) (2018) In press

REBASE ref # 26109

Sequence length:GenBank #:
Chromosome: 5,216,518 bp CP026217
plasmid pAER-1351: 27,298 bp CP026218
plasmid pAER-a82d: 29,846 bp CP026220

REBASE acronym: AspNIH4

Org_num: 27453

 

All begin C2U40_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2735 134 aa hypothetical protein
2740 M restriction endonuclease subunit M GTCANNNNNTTC M.AspNIH4VII
2745 S restriction endonuclease subunit S GTCANNNNNTTC S.AspNIH4VII
??? ATPase
2750 ATPase
2755 restriction endonuclease
2760 R DEAD/DEAH box helicase GTCANNNNNTTC AspNIH4VIIP
2765 ATP-binding protein
 
4690 ATP-dependent DNA helicase
4695 M type I restriction-modification system subunit CGANNNNNNNRTGT M.AspNIH4V
4700 S restriction endonuclease CGANNNNNNNRTGT S.AspNIH4V
4705 anticodon nuclease
4710 R DEAD/DEAH box helicase CGANNNNNNNRTGT AspNIH4VP
4715 NTPase KAP
 
14245 metal-dependent hydrolase
14250 R AhyYL17ORF670P (0% identity) AspNIH4ORF14270P
14255 Appr-1-p processing protein
14260 DUF4433 domain-containing protein
14265 S S.Vna51183ORF1755P (0% identity) S.AspNIH4ORF14270P
14270 M M.Ave951ORF19295P (0% identity) M.AspNIH4ORF14270P
14275 148 aa hypothetical protein
 
16495 99 aa hypothetical protein
16500 M restriction endonuclease subunit M AAGNNNNNGATR M.AspNIH4IV
16505 S restriction endonuclease AAGNNNNNGATR S.AspNIH4IV
16510 R type I restriction endonuclease subunit R AAGNNNNNGATR AspNIH4IVP
16515 ISL3 family transposase
 
18975 metal-dependent hydrolase
18980 R restriction endonuclease subunit R AGCANNNNNNNTCG AspNIH4VIP
18985 Appr-1-p processing protein
18990 DUF4433 domain-containing protein
18995 S restriction endonuclease subunit S AGCANNNNNNNTCG S.AspNIH4VI
19000 M type I restriction-modification system subunit AGCANNNNNNNTCG M.AspNIH4VI
19005 transcription factor
 
22610 transcriptional regulator
22615 R DEAD/DEAH box helicase ACAYNNNNNTGA AspNIH4VIIIP
22620 763 aa hypothetical protein
22625 249 aa hypothetical protein
22630 639 aa hypothetical protein
22635 S restriction endonuclease subunit S ACAYNNNNNTGA S.AspNIH4VIII
22640 M DNA methyltransferase ACAYNNNNNTGA M.AspNIH4VIII
22645 WYL domain-containing protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
4475 cell division protein DamX
4480 M M.AhyUAHDamP (1% identity) GATC M.AspNIH4Dam
4485 ribulose-phosphate 3-epimerase
 
16565 627 aa hypothetical protein
16570 RM CphBORF1677P (0% identity) AAGAACB AspNIH4III
16575 180 aa hypothetical protein
 
plasmid pAER-1351
 
24580 recombinase family protein
24585 M M.Ahy45096ORF295P (1% identity) CTCGAG M.AspNIH4II
24590 R Vfi15551ORF3539P (1% identity) CTCGAG AspNIH4IIP
24595 82 aa hypothetical protein
 
plasmid pAER-a82d
 
25035 72 aa hypothetical protein
25040 M M.Psp12121ORF31910P (0% identity) CGGCCG M.AspNIH4I
25045 R Psp12121ORF31910P (0% identity) CGGCCG AspNIH4IP
25050 70 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
2745 restriction endonuclease subunit S
??? R AhyA8McrBP (0% identity) AspNIH4McrBP
2755 R AhyA8McrCP (0% identity) AspNIH4McrCP
2760 DEAD/DEAH box helicase