Citrobacter freundii complex species CFNIH4 |
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Putative Citrobacter freundii complex species CFNIH4 RM systems
Ref: Weingarten,R.A. et al. unpublished
REBASE ref # 26066
| Sequence length: | GenBank #: | |
| Chromosome: | 5,079,781 bp | CP026231 |
| plasmid pCFR-0b27: | 206,795 bp | CP026233 |
| plasmid pCFR-4109: | 280,328 bp | CP026234 |
REBASE acronym: CfrNIH4
Org_num: 27448
All begin C2U41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8745 | M48 family peptidase | |||
| ??? | R | SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | CfrNIH4IP |
| 8755 | YecA family protein | |||
| 8760 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.CfrNIH4I |
| 8765 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.CfrNIH4I |
| 8770 | L-threonine dehydrogenase | |||
| 16575 | cell filamentation protein Fic | |||
| 16580 | R | SenS12VPHORF19925P (100% identity) | CfrNIH4ORF16595P | |
| 16585 | DUF91 domain-containing protein | |||
| 16590 | S | S.SenS12VPHORF19925P (89% identity) | S.CfrNIH4ORF16595P | |
| 16595 | M | M.SenS12VPHORF19925P (100% identity) | M.CfrNIH4ORF16595P | |
| 16600 | 291 aa hypothetical protein | |||
| 24350 | transcription factor | |||
| 24355 | M | M.CfrNIH4II (100% identity) | CRAAYNNNNNNTCNNC | M.CfrNIH4ORF24355P |
| 24360 | S | S.CfrNIH4II (100% identity) | CRAAYNNNNNNTCNNC | S.CfrNIH4ORF24355P |
| 24365 | DNA repair protein | |||
| 24370 | transcriptional regulator | |||
| 24375 | R | CfrNIH4IIP (100% identity) | CRAAYNNNNNNTCNNC | CfrNIH4ORF24355P |
| 24380 | metal-dependent hydrolase | |||
| plasmid pCFR-0b27 | ||||
| 27410 | metal-dependent hydrolase | |||
| 27415 | R | CfrNIH4ORF24355P (100% identity) | CRAAYNNNNNNTCNNC | CfrNIH4IIP |
| 27420 | transcriptional regulator | |||
| 27425 | DNA repair protein | |||
| 27430 | S | S.CfrNIH4ORF24355P (100% identity) | CRAAYNNNNNNTCNNC | S.CfrNIH4II |
| 27435 | M | M.CfrNIH4ORF24355P (100% identity) | CRAAYNNNNNNTCNNC | M.CfrNIH4II |
| 27440 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1665 | DUF4060 domain-containing protein | |||
| 1670 | M | M.CfrF1917ORF20175P (99% identity) | M.CfrNIH4ORF1670P | |
| 1675 | cruciferin | |||
| 11230 | 255 aa hypothetical protein | |||
| 11235 | M | M.Cfr398ORF14510P (100% identity) | M.CfrNIH4ORF11235P | |
| 11240 | 87 aa hypothetical protein | |||
| 12175 | drug/metabolite exporter YedA | |||
| 12180 | V | V.Eco5172ORF1715P (100% identity) | V.CfrNIH4ORF12185P | |
| 12185 | M | M.CspSL156ORF9755P (100% identity) | M.CfrNIH4ORF12185P | |
| 12190 | phosphohydrolase | |||
| 13720 | 128 aa hypothetical protein | |||
| 13725 | M | M.Cfr942ORF8625P (100% identity) | M.CfrNIH4ORF13725P | |
| 13730 | TrmB family transcriptional regulator | |||
| 13775 | RusA family crossover junction | |||
| 13780 | M | M.Cfr942ORF8570P (100% identity) | M.CfrNIH4ORF13780P | |
| 13785 | GntR family transcriptional regulator | |||
| 20050 | integrase | |||
| 20055 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CfrNIH4ORF20055P |
| 20060 | DUF2556 domain-containing protein | |||
| 20615 | ribulose-phosphate 3-epimerase | |||
| 20620 | M | M.Eco5172DamP (100% identity) | M.CfrNIH4DamP | |
| 20625 | cell division protein DamX | |||
| 23310 | ribonuclease | |||
| 23315 | M | M.CbrOC08ORF9660P (78% identity) | M1.CfrNIH4ORF23315P | |
| 23320 | 65 aa hypothetical protein | |||
| 23325 | 89 aa hypothetical protein | |||
| 23330 | M | M.CfrCF04ORFGP (93% identity) | M2.CfrNIH4ORF23315P | |
| 23335 | replication endonuclease | |||
| 23340 | 71 aa hypothetical protein | |||
| 23345 | M | M.Ero144ORF16520P (97% identity) | M.CfrNIH4ORF23345P | |
| 23350 | 69 aa hypothetical protein | |||
| 24825 | 91 aa hypothetical protein | |||
| 24830 | M | M.Ahe33651ORFEP (94% identity) | M.CfrNIH4ORF24830P | |
| 24835 | integrase | |||
| 25615 | integrase | |||
| 25620 | M | M.Kpn7014ORF23940P (100% identity) | M.CfrNIH4ORF25620P | |
| 25625 | R | SenNWU5ORF1685P (100% identity) | CfrNIH4ORF25620P | |
| 25630 | 269 aa hypothetical protein | |||
| plasmid pCFR-0b27 | ||||
| 26470 | 149 aa hypothetical protein | |||
| 26475 | M | M.YrupYR1ORFAP (82% identity) | M.CfrNIH4ORF26475P | |
| 26480 | IS21-like element ISAs29 family transposase | |||
| 27305 | 158 aa hypothetical protein | |||
| 27310 | M | M.YrupYR1ORFCP (100% identity) | M.CfrNIH4ORF27310P | |
| 27315 | 100 aa hypothetical protein | |||
| plasmid pCFR-4109 | ||||
| 27585 | DNA polymerase III subunit beta | |||
| 27590 | M | M.Sen3039ORF24445P (100% identity) | M.CfrNIH4ORF27590P | |
| 27595 | 76 aa hypothetical protein | |||