Ref: Weingarten,R.A. et al. unpublished

REBASE ref # 26066

Sequence length:GenBank #:
Chromosome: 5,079,781 bp CP026231
plasmid pCFR-0b27: 206,795 bp CP026233
plasmid pCFR-4109: 280,328 bp CP026234

REBASE acronym: CfrNIH4

Org_num: 27448

 

All begin C2U41_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
8745 M48 family peptidase
??? R SenSMo01ORF8345P (100% identity) TCAGNNNNNNTGC CfrNIH4IP
8755 YecA family protein
8760 S S.SenSMo01ORF8345P (100% identity) TCAGNNNNNNTGC S.CfrNIH4I
8765 M M.SenSMo01ORF8345P (100% identity) TCAGNNNNNNTGC M.CfrNIH4I
8770 L-threonine dehydrogenase
 
16575 cell filamentation protein Fic
16580 R SenPP122ORF4660P (100% identity) CfrNIH4ORF16595P
16585 DUF91 domain-containing protein
16590 S S.SenPP122ORF4660P (89% identity) S.CfrNIH4ORF16595P
16595 M M.SenPP122ORF4660P (100% identity) M.CfrNIH4ORF16595P
16600 291 aa hypothetical protein
 
24350 transcription factor
24355 M M.CfrNIH4II (100% identity) CRAAYNNNNNNTCNNC M.CfrNIH4ORF24355P
24360 S S.CfrNIH4II (100% identity) CRAAYNNNNNNTCNNC S.CfrNIH4ORF24355P
24365 DNA repair protein
24370 transcriptional regulator
24375 R CfrNIH4IIP (100% identity) CRAAYNNNNNNTCNNC CfrNIH4ORF24355P
24380 metal-dependent hydrolase
 
plasmid pCFR-0b27
 
27410 metal-dependent hydrolase
27415 R CfrNIH4ORF24355P (100% identity) CRAAYNNNNNNTCNNC CfrNIH4IIP
27420 transcriptional regulator
27425 DNA repair protein
27430 S S.CfrNIH4ORF24355P (100% identity) CRAAYNNNNNNTCNNC S.CfrNIH4II
27435 M M.CfrNIH4ORF24355P (100% identity) CRAAYNNNNNNTCNNC M.CfrNIH4II
27440 transcription factor
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1665 DUF4060 domain-containing protein
1670 M M.EclC4ORFDP (98% identity) M.CfrNIH4ORF1670P
1675 cruciferin
 
11230 255 aa hypothetical protein
11235 M M.Cfr398ORF14510P (100% identity) M.CfrNIH4ORF11235P
11240 87 aa hypothetical protein
 
12175 drug/metabolite exporter YedA
12180 V V.Eco5172ORF1715P (100% identity) V.CfrNIH4ORF12185P
12185 M M.CspSL156ORF9755P (100% identity) M.CfrNIH4ORF12185P
12190 phosphohydrolase
 
13720 128 aa hypothetical protein
13725 M M.Cfr942ORF8625P (100% identity) M.CfrNIH4ORF13725P
13730 TrmB family transcriptional regulator
 
13775 RusA family crossover junction
13780 M M.Cfr942ORF8570P (100% identity) M.CfrNIH4ORF13780P
13785 GntR family transcriptional regulator
 
20050 integrase
20055 M M.CspLUTT5ORF2195P (100% identity) ATGCAT M.CfrNIH4ORF20055P
20060 DUF2556 domain-containing protein
 
20615 ribulose-phosphate 3-epimerase
20620 M M.Eco5172DamP (100% identity) M.CfrNIH4DamP
20625 cell division protein DamX
 
23310 ribonuclease
23315 M M.Ero695ORF8615P (78% identity) M1.CfrNIH4ORF23315P
23320 65 aa hypothetical protein
23325 89 aa hypothetical protein
23330 M M.CfrCF04ORFGP (93% identity) M2.CfrNIH4ORF23315P
23335 replication endonuclease
 
23340 71 aa hypothetical protein
23345 M M.Ero144ORF16520P (97% identity) M.CfrNIH4ORF23345P
23350 69 aa hypothetical protein
 
24825 91 aa hypothetical protein
24830 M M.Ahe33651ORFEP (94% identity) M.CfrNIH4ORF24830P
24835 integrase
 
25615 integrase
25620 M M.Eal1732ORFBP (100% identity) M.CfrNIH4ORF25620P
25625 R Sen59880ORF7995P (100% identity) CfrNIH4ORF25620P
25630 269 aa hypothetical protein
 
plasmid pCFR-0b27
 
26470 149 aa hypothetical protein
26475 M site-specific DNA-methyltransferase M.CfrNIH4ORF26475P
26480 IS21-like element ISAs29 family transposase
 
27305 158 aa hypothetical protein
27310 M DNA cytosine methyltransferase M.CfrNIH4ORF27310P
27315 100 aa hypothetical protein
 
plasmid pCFR-4109
 
27585 DNA polymerase III subunit beta
27590 M M.Sen3039ORF24445P (100% identity) M.CfrNIH4ORF27590P
27595 76 aa hypothetical protein