Citrobacter species CFNIH10 |
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Putative Citrobacter species CFNIH10 RM systems
Ref: Weingarten,R.A. et al. MBio 9 (1) (2018) In press
REBASE ref # 26109
| Sequence length: | GenBank #: | |
| Chromosome: | 5,246,201 bp | CP026216 |
| plasmid pCIT-a850: | 126,940 bp | CP026212 |
| plasmid pKPC-933d: | 221,962 bp | CP026213 |
REBASE acronym: CspNIH10
Org_num: 27441
All begin C2U53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5860 | HigA family addiction module antidote protein | |||
| 5865 | R | EclNIH7IP (100% identity) | CspNIH10ORF5880P | |
| 5870 | 61 aa hypothetical protein | |||
| 5875 | S | S.EclNIH7I (86% identity) | S.CspNIH10ORF5880P | |
| 5880 | M | M.Eco9966I (100% identity) | M.CspNIH10ORF5880P | |
| 5885 | N-acetyltransferase | |||
| 13280 | nuclease | |||
| 13285 | R | Cfr030ORF20325P (98% identity) | GGYAYNNNNNTTGY | CspNIH10IP |
| 13290 | 397 aa hypothetical protein | |||
| 13295 | S | S.Min3227ORF2908P (58% identity) | GGYAYNNNNNTTGY | S.CspNIH10I |
| 13300 | M | M.Min3227ORF2908P (96% identity) | GGYAYNNNNNTTGY | M.CspNIH10I |
| 13305 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7010 | Fis family transcriptional regulator | |||
| 7015 | M | M.CspY3ORF2495P (99% identity) | ATGCAT | M.CspNIH10II |
| 7020 | DUF2556 domain-containing protein | |||
| 7535 | ribulose-phosphate 3-epimerase | |||
| 7540 | M | M.CspY3DamP (100% identity) | GATC | M.CspNIH10DamP |
| 7545 | cell division protein DamX | |||
| 17785 | 109 aa hypothetical protein | |||
| 17790 | M | M.CamCA71ORF7685P (100% identity) | M.CspNIH10ORF17790P | |
| 17795 | replication endonuclease | |||
| 18430 | 109 aa hypothetical protein | |||
| 18435 | M | M.Sen6218ORF3155P (83% identity) | M.CspNIH10ORF18435P | |
| 18440 | replication endonuclease | |||
| 25445 | 66 aa hypothetical protein | |||
| 25450 | M | M.Eho6ORF9565P (96% identity) | M.CspNIH10ORF25450P | |
| 25455 | 164 aa hypothetical protein | |||
| 25615 | drug/metabolite exporter YedA | |||
| 25620 | V | V.Cam4DcmP (100% identity) | V.CspNIH10DcmP | |
| 25625 | M | M.CspY3DcmP (100% identity) | M.CspNIH10DcmP | |
| 25630 | phosphohydrolase | |||
| 27985 | LexA family transcriptional regulator | |||
| 27990 | M | M.Cfa8141ORF11075P (98% identity) | M.CspNIH10ORF27990P | |
| 27995 | phage N-6-adenine-methyltransferase | |||
| 27990 | DNA cytosine methyltransferase | |||
| 27995 | M | M.Cfr20C16ORF17665P (97% identity) | M.CspNIH10ORF27995P | |
| 28000 | 310 aa hypothetical protein | |||
| 28045 | 84 aa hypothetical protein | |||
| 28050 | M | M.Kqu262ORF8530P (88% identity) | M.CspNIH10ORF28050P | |
| 28055 | 86 aa hypothetical protein | |||
| plasmid pCIT-a850 | ||||
| 1195 | 73 aa hypothetical protein | |||
| 1200 | M | M.Rpl64ORF26455P (100% identity) | M.CspNIH10ORF1200P | |
| 1205 | 0 aa hypothetical protein | |||
| plasmid pKPC-933d | ||||
| 1775 | IS110 family transposase | |||
| 1780 | R | YpsR2ORFAP (100% identity) | CCWGG | CspNIH10ORF1785P |
| 1785 | M | M1.Eho5ORF26025P (100% identity) | CCWGG | M.CspNIH10ORF1785P |
| 1790 | IS1 family transposase | |||
| 1945 | DNA polymerase III subunit beta | |||
| 1950 | M | M.Sen3039ORF24445P (100% identity) | M.CspNIH10ORF1950P | |
| 1955 | 76 aa hypothetical protein | |||
| 2630 | resolvase | |||
| 2635 | R | YpsR1ORFAP (99% identity) | CCWGG | CspNIH10ORF2640P |
| 2640 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.CspNIH10ORF2640P |
| 2645 | IS1 family transposase | |||