Escherichia coli Combat13F7 |
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Putative Escherichia coli Combat13F7 RM systems
Ref: Ho,P.L. et al. unpublished
REBASE ref # 26104
| Sequence length: | GenBank #: | |
| Chromosome: | 4,729,175 bp | CP019245 |
| plasmid pCombat13F7-1: | 45,156 bp | CP019246 |
| plasmid pCombat13F7-3: | 121,975 bp | CP019248 |
REBASE acronym: Eco13F7
Org_num: 27436
All begin BWI83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5415 | 134 aa hypothetical protein | |||
| 5420 | R | CfrC05ORF20960P (100% identity) | Eco13F7ORF5430P | |
| 5425 | S | S.EcoSCU102ORF2040P (100% identity) | S.Eco13F7ORF5430P | |
| 5430 | M | M2.EcoSCU102ORF2040P (100% identity) | M2.Eco13F7ORF5430P | |
| 5435 | M | M1.EcoSCU102ORF2040P (100% identity) | M1.Eco13F7ORF5430P | |
| 5440 | XRE family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 225 | replication endonuclease | |||
| 230 | M | M.EcoC6335ORF16125P (98% identity) | GATC | M.Eco13F7ORF230P |
| 235 | 100 aa hypothetical protein | |||
| 10345 | protein DamX | |||
| 10350 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13F7DamP |
| 10355 | ribulose-phosphate 3-epimerase | |||
| 11010 | DUF2556 domain-containing protein | |||
| 11015 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco13F7ORF11015P |
| 11020 | Fis family transcriptional regulator | |||
| 18110 | phosphohydrolase | |||
| 18115 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco13F7DcmP |
| 18120 | V | V.SflFF59DcmP (100% identity) | V.Eco13F7DcmP | |
| 18125 | EamA family transporter | |||
| plasmid pCombat13F7-1 | ||||
| 24620 | lipoprotein | |||
| 24335 | M | M.Eco13F7ORF230P (81% identity) | M.Eco13F7ORF24335P | |
| 24340 | replication endonuclease | |||
| plasmid pCombat13F7-3 | ||||
| 25985 | 73 aa hypothetical protein | |||
| 25990 | M | M.StyR64ORFAP (100% identity) | M.Eco13F7ORF25990P | |
| 25995 | 0 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15680 | shufflon system plasmid conjugative transfer | |||
| 15685 | R | KpnM1862ORFAP (97% identity) | Eco13F7ORF15690P | |
| 15690 | M | M.Pca1033ORF7480P (98% identity) | M.Eco13F7ORF15690P | |
| 15695 | 94 aa hypothetical protein | |||