Escherichia coli Combat2C1 |
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Putative Escherichia coli Combat2C1 RM systems
Ref: Ho,P.L. et al. unpublished
REBASE ref # 26104
| Sequence length: | GenBank #: | |
| Chromosome: | 5,202,049 bp | CP019243 |
| plasmid pCombat2C1-1: | 71,430 bp | CP019244 |
REBASE acronym: Eco2C1
Org_num: 27424
All begin BWI82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19530 | 113 aa hypothetical protein | |||
| 19535 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco2C1ORF19540P |
| 19540 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco2C1ORF19540P |
| 19545 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco2C1ORF19540P |
| 19550 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4505 | drug/metabolite exporter YedA | |||
| 4510 | V | V.SflC32DcmP (74% identity) | V.Eco2C1DcmP | |
| 4515 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco2C1DcmP |
| 4520 | phosphohydrolase | |||
| 7230 | protein ninF | |||
| 7235 | M | M.EcoOS142ORF7470P (99% identity) | M.Eco2C1ORF7235P | |
| 7240 | NinE family protein | |||
| 8295 | PerC family transcriptional regulator | |||
| 8300 | M | M.EcosA33ORF17935P (100% identity) | M.Eco2C1ORF8300P | |
| 8305 | 64 aa hypothetical protein | |||
| 12910 | Fis family transcriptional regulator | |||
| 12915 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco2C1ORF12915P |
| 12920 | transporter | |||
| 13545 | ribulose-phosphate 3-epimerase | |||
| 13550 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2C1DamP |
| 13555 | cell division protein DamX | |||
| 19000 | ATP-binding protein | |||
| 19005 | M | M.EcosS3ORF15775P (100% identity) | M.Eco2C1ORF19005P | |
| 19010 | 81 aa hypothetical protein | |||
| 19785 | PerC family transcriptional regulator | |||
| 19790 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2C1ORF19790P |
| 19795 | LexA family transcriptional regulator | |||
| 19830 | 67 aa hypothetical protein | |||
| 19835 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco2C1ORF19835P | |
| 19840 | phage holin, lambda family | |||
| 24780 | 75 aa hypothetical protein | |||
| 24785 | M | M.EfeC18ORF7705P (99% identity) | M.Eco2C1ORF24785P | |
| 24790 | 276 aa hypothetical protein | |||
| plasmid pCombat2C1-1 | ||||
| 26960 | 59 aa hypothetical protein | |||
| 26965 | M | M.SflFF87ORF23240P (100% identity) | M.Eco2C1ORF26965P | |
| 26970 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26670 | recombination protein NinB | |||
| 26675 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco2C1ORF26675P |
| 26680 | NinE family protein | |||