Escherichia coli ECONIH4 |
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Putative Escherichia coli ECONIH4 RM systems
Ref: Weingarten,R.A. et al. MBio (2018) In press
REBASE ref # 26109
| Sequence length: | GenBank #: | |
| Chromosome: | 5,277,702 bp | CP026399 |
| plasmid pECO-816c: | 103,161 bp | CP026403 |
| plasmid pECO-c85f: | 186,884 bp | CP026405 |
REBASE acronym: EcoNIH4
Org_num: 27407
All begin C3F40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11790 | IS5/IS1182 family transposase | |||
| 11795 | M | M.EroN260ORF10120P (92% identity) | M.EcoNIH4ORF11795P | |
| 11800 | glycosyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 685 | phosphohydrolase | |||
| 690 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoNIH4Dcm |
| 695 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.EcoNIH4DcmP |
| 700 | EamA family transporter | |||
| 5115 | 192 aa hypothetical protein | |||
| 5120 | M | M.Kpn13810ORF10210P (99% identity) | M.EcoNIH4ORF5120P | |
| 5125 | DUF968 domain-containing protein | |||
| 8280 | replication endonuclease | |||
| 8285 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.EcoNIH4ORF8285P |
| 8290 | 75 aa hypothetical protein | |||
| 11550 | LexA family transcriptional regulator | |||
| 11555 | M | M.EcoE7476ORFDP (100% identity) | GATC | M.EcoNIH4ORF11555P |
| 11560 | PerC family transcriptional regulator | |||
| 16030 | 78 aa hypothetical protein | |||
| 16035 | M | M.EcoW102ORF23380P (99% identity) | M.EcoNIH4ORF16035P | |
| 16040 | 117 aa hypothetical protein | |||
| 19350 | cell division protein DamX | |||
| 19355 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNIH4DamP |
| 19360 | ribulose-phosphate 3-epimerase | |||
| 20005 | DUF2556 domain-containing protein | |||
| 20010 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.EcoNIH4ORF20010P |
| 20015 | Fis family transcriptional regulator | |||
| 23490 | PerC family transcriptional regulator | |||
| 23495 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoNIH4ORF23495P |
| 23500 | LexA family transcriptional regulator | |||
| 23535 | 67 aa hypothetical protein | |||
| 23540 | M | M.EcoWATORF2902P (100% identity) | M.EcoNIH4ORF23540P | |
| 23545 | lysis protein S | |||
| 23675 | 257 aa hypothetical protein | |||
| 23680 | M | M.Sso8033ORF3755P (100% identity) | M.EcoNIH4ORF23680P | |
| 23685 | R | Sso8033ORF3755P (99% identity) | EcoNIH4ORF23680P | |
| 23690 | 281 aa hypothetical protein | |||
| 26470 | GntR family transcriptional regulator | |||
| 26475 | M | M1.Eco7152ORF1660P (100% identity) | M.EcoNIH4ORF26475P | |
| 26480 | DNA cytosine methyltransferase | |||
| 26475 | phage N-6-adenine-methyltransferase | |||
| 26480 | M | M2.EcoCX21ORF8550P (99% identity) | M.EcoNIH4ORF26480P | |
| 26485 | phage regulatory protein/antirepressor Ant | |||
| 26505 | 134 aa hypothetical protein | |||
| 26510 | M | M.Eco338ORFKP (100% identity) | M.EcoNIH4ORF26510P | |
| 26515 | 100 aa hypothetical protein | |||
| 27925 | recombination protein NinB | |||
| 5 | M | M.EcoNIH5ORF4395P (100% identity) | GATC | M.EcoNIH4ORF5P |
| 10 | NinE family protein | |||
| plasmid pECO-816c | ||||
| 28680 | 0 aa hypothetical protein | |||
| 28685 | M | M.EcoHM107ORF24245P (100% identity) | M.EcoNIH4ORF28685P | |
| 28690 | 73 aa hypothetical protein | |||
| plasmid pECO-c85f | ||||
| 30565 | 158 aa hypothetical protein | |||
| 30570 | M | M.YrupYR1ORFCP (100% identity) | M.EcoNIH4ORF30570P | |
| 30575 | 100 aa hypothetical protein | |||
| 30915 | 149 aa hypothetical protein | |||
| 30920 | M | M.YrupYR1ORFAP (83% identity) | M.EcoNIH4ORF30920P | |
| 30925 | IS21-like element ISAs29 family transposase | |||