Clostridium saccharolyticum WM1 |
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Putative Clostridium saccharolyticum WM1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12259
Complete sequence: 4,662,871 bp
GenBank #: CP002109 (NC_014376)
REBASE acronym: CsaWM1
Org_num: 6168
All begin Closa_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 194 | Integrase | |||
| 195 | M | M.Lsa1340ORF15905P (96% identity) | TGGCCA | M.CsaWM1ORF195P |
| 196 | 111 aa hypothetical protein | |||
| 302 | parB-like partition protein | |||
| 303 | M | M.Lsa1340ORF15370P (100% identity) | CCWGG | M.CsaWM1ORF303P |
| 304 | ATP-binding region ATPase domain protein | |||
| 734 | 139 aa hypothetical protein | |||
| 735 | M | M.Lsa1340ORF13100P (98% identity) | TGGCCA | M.CsaWM1ORF735P |
| 736 | 116 aa hypothetical protein | |||
| 1183 | pseudogene | |||
| 1184 | R | Lsa1340ORF10860P (100% identity) | CAATTG | CsaWM1ORF1186P |
| 1185 | C | C.Lsa1340ORF10860P (100% identity) | C.CsaWM1ORF1186P | |
| 1186 | M | M.Lsa1340ORF10860P (100% identity) | CAATTG | M.CsaWM1ORF1186P |
| 1187 | 605 aa conserved hypothetical protein | |||
| 2522 | transcriptional regulator, Crp/Fnr family | |||
| 2523 | R | Lsa1340ORF4140P (100% identity) | GGATG | CsaWM1ORF2523P |
| 2524 | 389 aa conserved hypothetical protein | |||
| 2791 | SEFIR domain protein | |||
| 2792 | RM | Lsa1340ORF2825P (100% identity) | CsaWM1ORF2792P | |
| 2793 | 284 aa hypothetical protein | |||
| 2848 | 167 aa hypothetical protein | |||
| 2849 | M | M.Lsa1340ORF2545P (96% identity) | M.CsaWM1ORF2849P | |
| 2850 | 118 aa conserved hypothetical protein | |||
| 3097 | 196 aa conserved hypothetical protein | |||
| 3098 | M | M.Lsa1340ORF1275P (97% identity) | M.CsaWM1ORF3098P | |
| 3099 | transposase IS200-family protein | |||
| 3544 | pseudogene | |||
| 3545 | M | M1.Lsa1340ORF20730P (100% identity) | M.CsaWM1ORF3544P | |
| 3546 | 107 aa conserved hypothetical protein | |||
| 3692 | 160 aa conserved hypothetical protein | |||
| 3693 | RM | Lsa1340ORF19995P (100% identity) | CsaWM1ORF3693P | |
| 3694 | 1217 aa conserved hypothetical protein | |||
| 3899 | extracellular solute-binding protein family 1 | |||
| 3900 | M | M2.Lsa1340ORF18960P (100% identity) | GGATG | M1.CsaWM1ORF3900P |
| 3901 | M | M1.Lsa1340ORF18960P (100% identity) | GGATG | M2.CsaWM1ORF3900P |
| 3902 | diguanylate cyclase | |||