Escherichia coli Combat11I9 |
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Putative Escherichia coli Combat11I9 RM systems
Ref: Ho,P.-L. et al. unpublished
REBASE ref # 26101
| Sequence length: | GenBank #: | |
| Chromosome: | 5,025,115 bp | CP021726 |
| plasmid pCombat11I9-1: | 224,039 bp | CP021727 |
| plasmid pCombat11I9-3: | 114,968 bp | CP021729 |
| plasmid pCombat11I9-4: | 58,890 bp | CP021730 |
REBASE acronym: Eco11I9
Org_num: 27416
All begin CDC27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23455 | 112 aa hypothetical protein | |||
| 23460 | R | EcoL26ORF21190P (100% identity) | Eco11I9ORF23470P | |
| 23465 | S | S.EcoC6335ORF21555P (100% identity) | S.Eco11I9ORF23470P | |
| 23470 | M | M.EcoL26ORF21190P (100% identity) | M.Eco11I9ORF23470P | |
| 23475 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10020 | drug/metabolite exporter YedA | |||
| 10025 | V | V.SsoSE61DcmP (100% identity) | V.Eco11I9DcmP | |
| 10030 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco11I9DcmP |
| 10035 | phosphohydrolase | |||
| 17450 | Fis family transcriptional regulator | |||
| 17455 | M | M.EcoL26ORF2455P (100% identity) | ATGCAT | M.Eco11I9ORF17455P |
| 17460 | transporter | |||
| 18010 | ribulose-phosphate 3-epimerase | |||
| 18015 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11I9DamP |
| 18020 | cell division protein DamX | |||
| 23200 | ATP-dependent helicase | |||
| 23205 | RM | EcoL26ORF21410P (100% identity) | GAAABCC | Eco11I9ORF23205P |
| 25140 | PerC family transcriptional regulator | |||
| 25145 | M | M.Efe41C20ORF1660P (100% identity) | GATC | M.Eco11I9ORF25145P |
| 25150 | LexA family transcriptional regulator | |||
| plasmid pCombat11I9-1 | ||||
| 25775 | 55 aa hypothetical protein | |||
| 25780 | M | M.YpsF1ORFCP (100% identity) | M.Eco11I9ORF25780P | |
| 25785 | nuclease | |||
| 26325 | 108 aa hypothetical protein | |||
| 26330 | M | M.YpsF1ORFBP (100% identity) | M.Eco11I9ORF26330P | |
| 26335 | 202 aa hypothetical protein | |||
| 26450 | DNA-binding protein | |||
| 26455 | M | M.YpsF1ORFDP (100% identity) | M.Eco11I9ORF26455P | |
| 26460 | 284 aa hypothetical protein | |||
| plasmid pCombat11I9-3 | ||||
| 28295 | 63 aa hypothetical protein | |||
| 28310 | M | M.Eco17C14ORF20690P (98% identity) | M.Eco11I9ORF28310P | |
| 28315 | recombination-associated protein RdgC | |||
| plasmid pCombat11I9-4 | ||||
| 28680 | 198 aa hypothetical protein | |||
| 28685 | R | Ubap201ORF4P (100% identity) | CCWGG | Eco11I9ORF28690P |
| 28690 | M | M.Sen8b1ORF15518P (100% identity) | CCWGG | M.Eco11I9ORF28690P |
| 28695 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCombat11I9-3 | ||||
| 28015 | modulator protein | |||
| ??? | M | M.Sen68045ORF16165P (98% identity) | AGACC | M.Eco11I9ORF28020P |
| 28025 | R | Sen63ORFKP (100% identity) | AGACC | Eco11I9ORF28020P |
| 28030 | maturation control protein | |||