Klebsiella pneumoniae WCHKP34 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae WCHKP34 RM systems
Ref: Liu,L. et al. unpublished
REBASE ref # 25198
| Sequence length: | GenBank #: | |
| Chromosome: | 5,291,863 bp | CP025963 |
| plasmid pIMP4_LL34: | 260,970 bp | CP025964 |
| plasmid pNDM1_LL34: | 59,730 bp | CP025965 |
| plasmid pQnrB_LL34: | 130,691 bp | CP025966 |
REBASE acronym: Kpn34
Org_num: 27369
All begin CEA73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23035 | 322 aa hypothetical protein | |||
| 23040 | R | Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | Kpn34ORF23045P |
| 23045 | M | M.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | M.Kpn34ORF23045P |
| 23050 | S | S.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | S.Kpn34ORF23045P |
| 23055 | endoribonuclease SymE | |||
| 23390 | S | S.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | S.Kpn34ORF23395P |
| 23395 | M | M.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | M.Kpn34ORF23395P |
| 23400 | R | Kpnr99ORF22815P (100% identity) | CGANNNNNNNNTGCC | Kpn34ORF23395P |
| 23405 | DUF4102 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1890 | cell division protein DamX | |||
| 1895 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn34DamP |
| 1900 | ribulose-phosphate 3-epimerase | |||
| 9145 | phosphohydrolase | |||
| 9150 | M | M.KpnvKPORF8710P (100% identity) | CCWGG | M.Kpn34ORF9150P |
| 9155 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn34ORF9150P | |
| 9160 | drug/metabolite exporter YedA | |||
| 19805 | regulator | |||
| 19810 | M | M2.Kpni392wORF2000P (100% identity) | M1.Kpn34ORF19810P | |
| 19815 | M | M1.Kpni392wORF2000P (100% identity) | M2.Kpn34ORF19810P | |
| 19820 | 72 aa hypothetical protein | |||
| plasmid pIMP4_LL34 | ||||
| 27775 | 144 aa hypothetical protein | |||
| 27770 | M | M.RplNDM1ORF37P (100% identity) | M.Kpn34ORF27770P | |
| 27765 | R | RplS62ORF30840P (100% identity) | Kpn34ORF27770P | |
| 27760 | 82 aa hypothetical protein | |||
| 27690 | 81 aa hypothetical protein | |||
| ??? | M | M.RplNDM1ORF92P (100% identity) | M.Kpn34ORF27685P | |
| 27680 | 1126 aa hypothetical protein | |||
| plasmid pNDM1_LL34 | ||||
| 28025 | resolvase | |||
| 28030 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn34ORF28035P |
| 28035 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn34ORF28035P |
| 28040 | IS1 family transposase | |||
| plasmid pQnrB_LL34 | ||||
| 29255 | 73 aa hypothetical protein | |||
| 29260 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpn34ORF29260P | |
| 29265 | 76 aa hypothetical protein | |||