Klebsiella oxytoca KONIH2 |
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Putative Klebsiella oxytoca KONIH2 RM systems
Ref: Weingarten,R.A. et al. unpublished
REBASE ref # 26074
| Sequence length: | GenBank #: | |
| Chromosome: | 6,190,364 bp | CP026285 |
| plasmid pKOR-01e8: | 198,115 bp | CP026281 |
| plasmid pKOR-0e8e: | 48,636 bp | CP026278 |
| plasmid pKOR-e3cb: | 262,864 bp | CP026282 |
| plasmid pKPC-55bf: | 152,041 bp | CP026280 |
REBASE acronym: KoxNIH2
Org_num: 27349
All begin C2U42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26820 | endoribonuclease SymE | |||
| 26825 | S | S.Kox71171ORFEP (87% identity) | AACNNNNNNNRTGAC | S.KoxNIH2III |
| 26830 | M | M.Kox71171ORFEP (99% identity) | AACNNNNNNNRTGAC | M.KoxNIH2III |
| 26835 | R | Kox71171ORFEP (99% identity) | AACNNNNNNNRTGAC | KoxNIH2IIIP |
| 26840 | 322 aa hypothetical protein | |||
| 34180 | IS1 family transposase | |||
| 34185 | R | Cam165IP (99% identity) | TTCANNNNNNTTC | KoxNIH2IIP |
| 34190 | S | S.Esp175ORF3740P (100% identity) | TTCANNNNNNTTC | S.KoxNIH2II |
| 34195 | M | M.Cam165I (99% identity) | TTCANNNNNNTTC | M.KoxNIH2II |
| 34200 | 119 aa hypothetical protein | |||
| plasmid pKPC-55bf | ||||
| 1605 | 77 aa hypothetical protein | |||
| 1610 | M | M.KpnDS1ORF26860P (99% identity) | CNACNNNNNRTGG | M.KoxNIH2I |
| 1615 | S | S.KpnDS1ORF26860P (100% identity) | CNACNNNNNRTGG | S.KoxNIH2I |
| 1620 | R | KpnM9111ORFAP (99% identity) | CNACNNNNNRTGG | KoxNIH2IP |
| 1625 | nuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6100 | transcriptional regulator | |||
| 6105 | M | M.Kox5ORF12360P (98% identity) | M.KoxNIH2ORF6105P | |
| 6110 | RusA family crossover junction | |||
| 6975 | TrmB family transcriptional regulator | |||
| 6980 | M | M.Kva118ORF8335P (99% identity) | M.KoxNIH2ORF6980P | |
| 6990 | 429 aa hypothetical protein | |||
| 8845 | phosphohydrolase | |||
| 8850 | M | M.Kox9161DcmP (100% identity) | CCWGG | M.KoxNIH2DcmP |
| 8855 | V | V.KpnJA29DcmP (100% identity) | V.KoxNIH2DcmP | |
| 8860 | drug/metabolite exporter YedA | |||
| 9050 | 77 aa hypothetical protein | |||
| 9055 | M | M.Kpni326eORF3134P (98% identity) | M.KoxNIH2ORF9055P | |
| 9060 | 76 aa hypothetical protein | |||
| 20985 | ribulose-phosphate 3-epimerase | |||
| 20990 | M | M.KspPL2018DamP (100% identity) | GATC | M.KoxNIH2DamP |
| 20995 | cell division protein DamX | |||
| 23825 | 64 aa hypothetical protein | |||
| 23830 | M | M.Kpn5053ORF3243P (93% identity) | M1.KoxNIH2ORF23830P | |
| 23835 | 90 aa hypothetical protein | |||
| 23840 | M | M1.Kpnst01ORFDP (95% identity) | M2.KoxNIH2ORF23830P | |
| 23845 | replication endonuclease | |||
| 23855 | 3-5 exoribonuclease | |||
| 23860 | M | M.SliJL02ORF24580P (93% identity) | M.KoxNIH2ORF23860P | |
| 23865 | ImmA/IrrE family metallo-endopeptidase | |||
| 26535 | IS3 family transposase | |||
| 26540 | M | M.RplS25DndCP (99% identity) | M.KoxNIH2DndCP | |
| 26545 | DNA sulfur modification protein DndB | |||
| 26540 | DNA phosphorothioation system sulfurtransferase | |||
| 26545 | M | M.KmiTHO011DndBP (100% identity) | M.KoxNIH2DndBP | |
| 26550 | XRE family transcriptional regulator | |||
| 30300 | 69 aa hypothetical protein | |||
| 30305 | M | M.KoxNIH2ORF25P (100% identity) | M.KoxNIH2ORF30305P | |
| 30310 | DUF1317 domain-containing protein | |||
| 30435 | antitermination protein | |||
| 30445 | M | M.Csp411ORF11030P (78% identity) | M.KoxNIH2ORF160P | |
| 30450 | 93 aa hypothetical protein | |||
| plasmid pKOR-01e8 | ||||
| 2045 | IS21-like element ISAs29 family transposase | |||
| 2050 | M | M.YrupYR1ORFAP (83% identity) | M.KoxNIH2ORF2050P | |
| 2055 | 149 aa hypothetical protein | |||
| 2395 | 100 aa hypothetical protein | |||
| 2400 | M | M.YrupYR1ORFCP (100% identity) | M.KoxNIH2ORF2400P | |
| 2405 | 158 aa hypothetical protein | |||
| plasmid pKOR-0e8e | ||||
| 20 | 69 aa hypothetical protein | |||
| 25 | M | M.KoxNIH2ORF30305P (100% identity) | M.KoxNIH2ORF25P | |
| 30 | DUF1317 domain-containing protein | |||
| 150 | antitermination protein | |||
| 160 | M | M.Csp411ORF11030P (78% identity) | M.KoxNIH2ORF160P | |
| 165 | 93 aa hypothetical protein | |||
| plasmid pKPC-55bf | ||||
| 1040 | 0 aa hypothetical protein | |||
| 1045 | M | M.Rpl64ORF26455P (100% identity) | M.KoxNIH2ORF1045P | |
| 1050 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKOR-e3cb | ||||
| 3915 | DNA methylase | |||
| 3920 | R | Kqu2018ORF4320P (100% identity) | KoxNIH2ORF3915P | |
| 3925 | inovirus Gp2 family protein | |||