Fibrobacter succinogenes S85 (JCVI) |
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Putative Fibrobacter succinogenes S85 (JCVI) RM systems
Ref: Durkin,A.S. et al. unpublished
REBASE ref # 11954
Complete sequence: 3,843,004 bp
GenBank #: CP002158
REBASE acronym: Fss
Org_num: 1426
All begin FSU_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | 171 aa conserved hypothetical protein | |||
| 1811 | S | S.Fsu85ORF1346P (100% identity) | S.FssORF1812P | |
| 1812 | M | M.Fsu85ORF1346P (100% identity) | M.FssORF1812P | |
| 1813 | R | Fsu85ORF1346P (100% identity) | FssORF1812P | |
| 1814 | conserved domain protein | |||
| 2213 | 334 aa conserved hypothetical protein | |||
| 2216 | R | Fsu85ORF1722P (100% identity) | FssORF2218P | |
| 2217 | S | S.Fsu85ORF1722P (100% identity) | S.FssORF2218P | |
| 2218 | M | M.Fsu85ORF1722P (100% identity) | M.FssORF2218P | |
| 2219 | transcriptional regulator, LysR family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 135 | pyruvate synthase | |||
| 136 | M | M.Fsu85ORF2878P (100% identity) | CTGCAG | M.FssORF136P |
| 137 | R | Fsu85ORF2878P (100% identity) | CTGCAG | FssORF136P |
| 138 | 250 aa hypothetical protein | |||
| 467 | 3-isopropylmalate dehydratase, small subunit | |||
| 468 | M | M.Fsu85ORF69P (100% identity) | GACGTC | M.FssORF468P |
| 469 | transcriptional regulator | |||
| 1133 | RNA polymerase sigma-70 factor | |||
| 1135 | RM | Fsu85ORF699P (100% identity) | FssORF1135P | |
| 1136 | valine--tRNA ligase | |||
| 1378 | 153 aa hypothetical protein | |||
| 1379 | M | M.Fsu85ORF930P (100% identity) | GGWCC | M.FssI |
| 1381 | R | Fsu85ORF930P (100% identity) | GGWCC | FssI |
| ??? | C | transcriptional regulator | C.FssIP | |
| 1382 | 71 aa hypothetical protein | |||
| 1830 | 620 aa hypothetical protein | |||
| 1831 | R | Fsu85ORF1364P (100% identity) | FssORF1831P | |
| 1832 | 230 aa hypothetical protein | |||
| 3011 | DNA-binding protein | |||
| 3012 | RM | Fsu85ORF2448P (100% identity) | FssORF3012P | |
| 3013 | 645 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 672 | 83 aa hypothetical protein | |||
| 673 | R | Fsu85ORF263P (100% identity) | FssORF674P | |
| 674 | M | M.Fsu85ORF263P (93% identity) | M.FssORF674P | |
| 676 | 265 aa conserved hypothetical protein | |||
| 1756 | 351 aa conserved hypothetical protein | |||
| 1757 | R | Fsu85ORF1289P (100% identity) | FssORF1757P | |
| 1758 | 75 aa hypothetical protein | |||
| 1764 | 837 aa hypothetical protein | |||
| 1765 | M | M.Fsu85ORF1298P (100% identity) | M.FssORF1765P | |
| 1766 | conserved domain protein | |||
| 2330 | conserved domain protein | |||
| 2331 | M | M.Fsu85ORF1827P (100% identity) | M.FssORF2331P | |
| 2332 | R | type III restriction-modification system-like | FssORF2331P | |
| 2333 | FtsK/SpoIIIE family protein | |||
| 3067 | 119 aa conserved hypothetical protein | |||
| 3068 | M | M.Fsu85ORF2500P (100% identity) | M.FssORF3068P | |
| 3069 | R | Fsu85ORF2500P (100% identity) | FssORF3068P | |
| 3070 | succinate dehydrogenase and fumarate reductase | |||