Escherichia coli DH5alpha |
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Putative Escherichia coli DH5alpha RM systems
Ref: Chen,J. and Wang,H. unpublished
REBASE ref # 26927
Complete sequence: 4,833,062 bp
GenBank #: CP026085
REBASE acronym: EcoDH5aC
Org_num: 27278
All begin C1467_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21510 | 428 aa hypothetical protein | |||
| 21515 | S | S.SflN101ORF11895P (100% identity) | S.EcoDH5aCORF21520P | |
| 21520 | M | M.EcohubtORF19935P (99% identity) | M.EcoDH5aCORF21520P | |
| 21525 | 128 aa hypothetical protein | |||
| 21815 | IS4 family transposase ISVsa5 | |||
| 21820 | R | EcohubtORF20055P (92% identity) | AACNNNNNNGTGC | EcoDH5aCIP |
| 21825 | M | M.EcohubtORF20055P (100% identity) | AACNNNNNNGTGC | M.EcoDH5aCI |
| 21830 | S | S.EcohubtORF20055P (98% identity) | AACNNNNNNGTGC | S.EcoDH5aCI |
| 21835 | 582 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | cell division protein DamX | |||
| 1960 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDH5aCDamP |
| 1965 | ribulose-phosphate 3-epimerase | |||
| 2545 | DUF2556 domain-containing protein | |||
| 2550 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoDH5aCORF2550P |
| 2555 | Fis family transcriptional regulator | |||
| 7555 | recombination protein NinB | |||
| 7560 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoDH5aCORF7560P |
| 7565 | NinE family protein | |||
| 9865 | phosphohydrolase | |||
| 9870 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDH5aCDcm |
| 9875 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoDH5aCDcmP |
| 9880 | drug/metabolite exporter YedA | |||
| 16390 | replication endonuclease | |||
| 16395 | M | M.EcohubtORF7795P (100% identity) | GATC | M.EcoDH5aCORF16395P |
| 16400 | 75 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21525 | 128 aa hypothetical protein | |||
| 21530 | R | EcohubtMcrCP (100% identity) | EcoDH5aCMcrCP | |
| 21535 | R | SflN101McrBP (100% identity) | EcoDH5aCMcrBP | |
| 21540 | HNH endonuclease | |||