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Putative Ralstonia solanacearum RM systems
Ref: She,X. and He,Z. unpublished
REBASE ref # 26087
Complete sequence: 3,788,542 bp
GenBank #: CP025985
REBASE acronym: RsoRSCM
Org_num: 27380
All begin CYD94_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
160 | IS5-like element IS1405 family transposase | |||
165 | M | M.RsoX05ORF971P (97% identity) | M.RsoRSCMORF165P | |
??? | R | RsoWR1ORFKP (100% identity) | RsoRSCMORF165P | |
180 | sensor histidine kinase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
20 | IS5-like element IS1421 family transposase | |||
25 | V | V.AavCOLB1ORF15035P (81% identity) | V.RsoRSCMORF35P | |
30 | 77 aa hypothetical protein | |||
35 | M | M.AavCOLB1ORF15035P (92% identity) | M.RsoRSCMORF35P | |
40 | 1042 aa hypothetical protein | |||
35 | DNA (cytosine-5-)-methyltransferase | |||
40 | RM | AavCOLB1ORF15040P (85% identity) | RsoRSCMORF40P | |
45 | transposase | |||
1275 | type III secretion system YopJ family effector | |||
1280 | M | M.RsoRSCMORF6200P (100% identity) | M.RsoRSCMORF1280P | |
1285 | 1367 aa hypothetical protein | |||
2065 | Com family DNA-binding transcriptional | |||
2070 | M | M.RsoT78ORF1950P (100% identity) | M.RsoRSCMORF2070P | |
2075 | 143 aa hypothetical protein | |||
3275 | 79 aa hypothetical protein | |||
3280 | R | AmeE31ORF24735P (92% identity) | RsoRSCMORF3290P | |
3285 | V | V.AmeE31ORF24735P (89% identity) | V.RsoRSCMORF3290P | |
3290 | M | M.AmeE31ORF24735P (93% identity) | M.RsoRSCMORF3290P | |
3295 | 185 aa hypothetical protein | |||
6075 | 135 aa hypothetical protein | |||
6080 | M | M2.RsosSY1ORF6610P (99% identity) | M1.RsoRSCMORF6080P | |
6085 | M | M1.RsoT42ORF12755P (72% identity) | M2.RsoRSCMORF6080P | |
6090 | type III secretion system effector protein | |||
6195 | YOPP/AvrRxv family protein | |||
6200 | M | M.RsoRSCMORF1280P (100% identity) | M.RsoRSCMORF6200P | |
6205 | 1367 aa hypothetical protein | |||
6610 | ATP-dependent endonuclease | |||
6615 | RM | XorMAI134ORF10425P (97% identity) | RsoRSCMORF6615P | |
6620 | SAM-dependent methyltransferase | |||
6615 | 1022 aa hypothetical protein | |||
6620 | M | M.XorMAI134ORF10420P (96% identity) | M.RsoRSCMORF6620P | |
6625 | 64 aa hypothetical protein | |||
7875 | tryptophan synthase subunit beta | |||
7880 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.RsoRSCMORF7880P |
7885 | tryptophan synthase subunit alpha |